PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008245098.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 263aa    MW: 29421.2 Da    PI: 10.5183
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008245098.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.79.4e-32193246255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hv+SHLQ+YR+
  XP_008245098.1 193 PRMRWTTSLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVRSHLQMYRT 246
                     9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.02E-16190246IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.3E-28191246IPR009057Homeodomain-like
TIGRFAMsTIGR015578.4E-24193246IPR006447Myb domain, plants
PfamPF002493.6E-8194245IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MRATSESAEW IFLATILGLE MLSAACDQAS SPRRPHYALS GMLLAIAAVL ISIWELIYKG  60
KREGVVLRRW GMLWWFYHPP PPRHTPFGTL TDIYGLVAGI SQCICSIIQY VYCLRHADNP  120
IKASILPAIF LICLGGSKLG KNQRNANTTD NNILRKPSDS NSSTHTSTIT RTSSSSPLFQ  180
AQGGLLRSRL RAPRMRWTTS LHNRFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVRSH  240
LQMYRTVKTA DRAAAFSEPK KVW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-17194248458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-17194248458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-17194248357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-17194248357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-17194248357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-17194248357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-17194248458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-17194248458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-17194248458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-17194248458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-17194248458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-17194248458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008245098.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008245098.10.0PREDICTED: uncharacterized protein LOC103343207 isoform X2
TrEMBLA0A251P1Q22e-93A0A251P1Q2_PRUPE; Uncharacterized protein
STRINGXP_008245097.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.12e-36G2-like family protein