PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_008244856.1

Organism

Prunus mume

Taxonomic ID

102107

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

VOZ

Protein Properties

Length: 455aa MW: 50591.8 Da PI: 5.173

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_008244856.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	399.4	8.1e-123	207	421	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 pp saflgpkca+w+c+rpa s+++q+ycss ha lalnegl+g p+lrp+gi lkd++lfaal+ak+qgk+vgip+cegaat k+pwna+el XP_008244856.1 207 PPVSAFLGPKCAFWECSRPA--SNRCQNYCSSGHALLALNEGLLGRPPILRPGGIALKDSSLFAALNAKTQGKDVGIPNCEGAATLKCPWNAPEL 299 788**************8..689****************************************************************** PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdls+l+getirewlff kprrafesgnrkqrslpdy+grgwhesrkqvmkefgg+krsyymdpqpss ewhl+eye+n++da+alyrlelk XP_008244856.1 300 FDLSFLDGETIREWLFFGKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGQKRSYYMDPQPSSDREWHLFEYEVNNSDACALYRLELKFG 394 ******************************************************************************************* PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 +kks+kgkvs+d+ladlqkk+grlta XP_008244856.1 395 SAKKSSKGKVSSDPLADLQKKMGRLTA 421 ***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence Send to blast
MLKGSKGKCE SPSHKLLKEK TKTRLEDLQG MLTNVQAAKK ESGTDDIVFL VEQANQMVRE 60 WRAELNEPSP ASSLLGGSLG SFCEEELARV LKHLDEEDDA TSPLKQLPPS MPESDLLNIH 120 SSNMLAFKEE FFVSKEPEED IFQGFDQCYT ASNLQNTMVD NSDLTTQLKY HHFDFHEDLD 180 EGLFIEGNNI TQSEEDVVPN VLPDICPPVS AFLGPKCAFW ECSRPASNRC QNYCSSGHAL 240 LALNEGLLGR PPILRPGGIA LKDSSLFAAL NAKTQGKDVG IPNCEGAATL KCPWNAPELF 300 DLSFLDGETI REWLFFGKPR RAFESGNRKQ RSLPDYNGRG WHESRKQVMK EFGGQKRSYY 360 MDPQPSSDRE WHLFEYEVNN SDACALYRLE LKFGSAKKSS KGKVSSDPLA DLQKKMGRLT 420 AEVPTDDAST VKGKASTKAD AGNIFSSHNQ TTSTT

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence Send to blast

MLKGSKGKCE SPSHKLLKEK TKTRLEDLQG MLTNVQAAKK ESGTDDIVFL VEQANQMVRE  60
WRAELNEPSP ASSLLGGSLG SFCEEELARV LKHLDEEDDA TSPLKQLPPS MPESDLLNIH  120
SSNMLAFKEE FFVSKEPEED IFQGFDQCYT ASNLQNTMVD NSDLTTQLKY HHFDFHEDLD  180
EGLFIEGNNI TQSEEDVVPN VLPDICPPVS AFLGPKCAFW ECSRPASNRC QNYCSSGHAL  240
LALNEGLLGR PPILRPGGIA LKDSSLFAAL NAKTQGKDVG IPNCEGAATL KCPWNAPELF  300
DLSFLDGETI REWLFFGKPR RAFESGNRKQ RSLPDYNGRG WHESRKQVMK EFGGQKRSYY  360
MDPQPSSDRE WHLFEYEVNN SDACALYRLE LKFGSAKKSS KGKVSSDPLA DLQKKMGRLT  420
AEVPTDDAST VKGKASTKAD AGNIFSSHNQ TTSTT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_008244856.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008244856.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X1
Refseq	XP_016652397.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	1e-163	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	M5WU25	0.0	M5WU25_PRUPE; Uncharacterized protein
STRING	XP_008244856.1	0.0	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-143	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]