PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_008243984.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 807aa MW: 89058.8 Da PI: 6.9385 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.4 | 2.9e-07 | 52 | 94 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I +++ + q++++++ + XP_008243984.1 52 AWTHQEEESFFAALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 94 6*****************99.*********.***********976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 6.71E-10 | 43 | 99 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 8.2E-5 | 46 | 97 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 12.128 | 48 | 99 | IPR017884 | SANT domain |
SMART | SM00717 | 3.5E-4 | 49 | 97 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.13E-4 | 52 | 95 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 807 aa Download sequence Send to blast |
MQIGSTVIVN SEAHPHQGGF FVQDGGPGLA PSTSNHVALQ QPVKKPTRQW AAWTHQEEES 60 FFAALRQVGK NFEKITCRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLYLDS KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LEHQLLKDRK KSVRKRPSQG ENCPPNAPST 180 LSNQNRPSGH DNRTVKLVLV DSHNIQKLGP GKASLKRNVN IGVNRSNKGD SSTMKPARQR 240 RKPAYKKWEK AAIAGVSLVA DAAEHLERAI TDKEVEQDRS AAGQSSAVPV GKILPPLPAF 300 VQNIDAESGI NNCMKLKLQL FPIDDGTRRA LENDKHNPYL ELTLSTRKKI SSVLDHLNRK 360 WGNSNVASGE LTLFHYSVQR DNLMGYPRWM QDSIVSAADV YATIGCPPVF RLRYGWFSNA 420 ELGSVGLQTP VASCSNQGEH DINEEKRKEQ IVDSAPISPL STDNQSADIH KDHLTSTNNS 480 CVLSALDYQH SQPQLPERGK PRYNHSLGLT SAEESNEING YICVSPNNNF VGDPTEITSW 540 HKKEAGDQST SRHRGDVDDL RSITGTALSA GVWADSLTNI SMGDLLSGVS HDLDTNCIDP 600 PVAEGSQCLQ QIPFSCDSFD AVIAAHISRQ NKMGCQPTME CHVSSIWDAE ETCDAFSFQK 660 NSVFCQEVSS LSAVAPPGAS SVGSDCMVEE ISVVERPIDD PPQGGPTDEC QSDPRILESS 720 VKDFNALTDI YWPESLGPLD LEMPSSKYHS EDFVLSDSLS GLNRLIASSL DAFQNCSFFG 780 ANKREPTASV EARETASFSD FKIGNGV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_008243984.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008243984.1 | 0.0 | PREDICTED: TSL-kinase interacting protein 1 isoform X2 | ||||
Swissprot | Q8LJT8 | 0.0 | TKI1_ARATH; TSL-kinase interacting protein 1 | ||||
TrEMBL | A0A251NUP7 | 0.0 | A0A251NUP7_PRUPE; Uncharacterized protein | ||||
STRING | XP_008243983.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36960.2 | 0.0 | TSL-kinase interacting protein 1 |