PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008243412.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 339aa    MW: 37854.8 Da    PI: 4.6823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008243412.2genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83e-19117166154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     s ++GVr++k +g+W+AeIrd +     + +r +lg+f t+e+A ka++a r++le
  XP_008243412.2 117 SPFRGVRQRK-WGKWAAEIRDpF-----KgRRTWLGTFNTPEDASKAYEAKRLELE 166
                     679******9.**********55.....45************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.689118176IPR001471AP2/ERF domain
SMARTSM003803.8E-14118181IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-16118169IPR016177DNA-binding domain
PfamPF008471.5E-11119167IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-20119166IPR001471AP2/ERF domain
PRINTSPR003679.4E-9119130IPR001471AP2/ERF domain
CDDcd000181.58E-21119160No hitNo description
PRINTSPR003679.4E-9141157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MPEPRKQPLN QRNGFRKFKX XXXXAEASKK VRKVRIICYD PDATDESSSS EDEGRGRSYV  60
KKPKRIVHEI NLHPIFTPSA KVVVEPESSC QDSNNGVKTP KPKVGFFART SRRQSSSPFR  120
GVRQRKWGKW AAEIRDPFKG RRTWLGTFNT PEDASKAYEA KRLELEELWA RETAAPAASS  180
EKSNNTSSSA VVSHMSYANI QQPVSSEDSD SALSRRSPSS VLDLETSASN NIGNVVDLEK  240
EVVDDSPDLG ELQIPDLGFL DDPLGSLPFE NELSLGPELD SLCLEEFGKF FNEFSSIEDV  300
QIGGIDGYEP TSLPDFYFED LGKDDISCWL DEPLNIACQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008243412.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008243412.20.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A251R5T10.0A0A251R5T1_PRUPE; Uncharacterized protein
STRINGXP_008243412.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-27ERF family protein