PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008236996.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 286aa    MW: 33059 Da    PI: 5.6754
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008236996.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.61.5e-1681412128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatg 87 
                     p GfrFhPtd+e+v  +L+  + +++    + +++i+ +++  +k+eP+++ +k+ +    ++++yf s  +k ++  kr  r + + g+W++t 
  XP_008236996.1   8 PLGFRFHPTDKEIVGSFLHTLLVDRNplmPPYSNFIRACNLfgNKLEPSEIWNKYGGpqlVDQDLYFLSGLKKLSP--KRMDRsIGHGGTWSETE 100
                     89******************988888787666678****9833589*****7544333335668899998888766..58888567799****** PP

             NAM  88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + k +     + + +g k+ + + +  + + e+t W+++ey+l
  XP_008236996.1 101 SFKLIEYDngNPNPIGRKRKFRYEN--KGSEEHTWWLLDEYSL 141
                     ****9998444456********984..334469********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-193165IPR003441NAC domain
PROSITE profilePS5100522.3877166IPR003441NAC domain
PfamPF023651.8E-118141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MAHYQNVPLG FRFHPTDKEI VGSFLHTLLV DRNPLMPPYS NFIRACNLFG NKLEPSEIWN  60
KYGGPQLVDQ DLYFLSGLKK LSPKRMDRSI GHGGTWSETE SFKLIEYDNG NPNPIGRKRK  120
FRYENKGSEE HTWWLLDEYS LFVGPKNDYN DRCYDFDFVI CRMRKNDRAS SKEINLKRSS  180
QDQVQKKRST NKKMKKDHQM GSTEESSSHV QQGCSSSLTG GELVVSYDDV DPTDLTFFED  240
NPIFNIEQIL CETKVEDACS PSNSENVDSS YSKWTESYME ELMACI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008236996.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008236996.10.0PREDICTED: NAC domain-containing protein 83-like
TrEMBLA0A314UFS10.0A0A314UFS1_PRUYE; NAC domain-containing protein 83-like
STRINGXP_008236996.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1903626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-08NAC family protein