PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008234445.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 314aa    MW: 34847.6 Da    PI: 6.5214
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008234445.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.1e-20137187255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka++ a+ kl+g
  XP_008234445.1 137 HYRGVRRRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDLAAFKLRG 187
                     7********.**********9...4334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.2E-32136196IPR001471AP2/ERF domain
CDDcd000181.31E-30137195No hitNo description
PfamPF008478.1E-15137187IPR001471AP2/ERF domain
SuperFamilySSF541716.34E-23137196IPR016177DNA-binding domain
PROSITE profilePS5103224.843137195IPR001471AP2/ERF domain
SMARTSM003806.6E-36137201IPR001471AP2/ERF domain
PRINTSPR003672.2E-13138149IPR001471AP2/ERF domain
PRINTSPR003672.2E-13177197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MATEHEETSA LELIRQHLLN EFTSMDSFIS GLNVCTSQIP QPQSSHLPSQ SKTNSTPSSD  60
QYFRISDFLL PEIDQDTQFE TKPQIAHPKP PKHSTLSHRK PAINVAIPSP PVLSGDEPQN  120
PSSSNNVVVE ASETARHYRG VRRRPWGKYA AEIRDPNRRG SRVWLGTFDT AIEAAKAYDL  180
AAFKLRGSKA ILNFPLEAGK TAEAEQPLQT TVGGSRKRRR ESSEQSTESQ ERQSTDSQER  240
QSSEEISNKE MKKENQEMVS SSSSNSGVCP LTPSSWTAVW DISKENEQGI FSVPPLSPLS  300
PHTSFLGFPQ LMVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-28136196161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215219RKRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00556DAPTransfer from AT5G51190Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008234445.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3695460.0KT369546.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 14 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008234445.10.0PREDICTED: ethylene-responsive transcription factor ERF105
TrEMBLA0A0M4KPH80.0A0A0M4KPH8_9ROSA; AP2/EREBP family transcription factor-like protein 14
STRINGXP_008234445.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108534109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.16e-52ERF family protein