PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008232272.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 616aa    MW: 66803.8 Da    PI: 5.1107
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008232272.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like73.23.6e-23107160155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k +++Wt++L +rF+eav  + G ekA+Pk+ile+m+v+gLt+++++SHLQkYR+
  XP_008232272.1 107 KHKVEWTSQLQARFLEAVYCI-GLEKAVPKRILEVMNVEGLTRANIASHLQKYRM 160
                     6799*****************.********************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23007.6E-51890No hitNo description
SuperFamilySSF466893.05E-16104164IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.9E-24106164IPR009057Homeodomain-like
TIGRFAMsTIGR015573.6E-23107160IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    Send to blast
MYVCVSIVFL IGLNLDAVVS TDNRESTILA ALEHGATHYI VKPVCFSDVR NLWQFVVGGN  60
EGTRNPHIVV EQIGCVSGES LSSSNGDSNS KRKRPSQGGK DFISIKKHKV EWTSQLQARF  120
LEAVYCIGLE KAVPKRILEV MNVEGLTRAN IASHLQKYRM FLRKVAGRIA VSKLPVDLPQ  180
HTRHPLLNQN IPGKKPATPD KPISLRDNFE LSVKPNASNL SLLGRRPNDQ EATSSGSSPQ  240
SGYITGHPYL PYDTSKFANL PLMSSTPNAS QPAASCSGFQ SNNALGNLST TNPSPITNPS  300
PKLISTDIPY SFGRNSANGV HIGTNPVQMY QQKAQETPQP FTTTGNGNSN NDSWNNSNVM  360
TSYTNNSYGT GMQMTITSTA GGGRLAGHMA PTQTVFNNVG WDSNGVNNNC GDLVINNGTQ  420
NDDQNRNVLQ VENVVFGYDF PQKESSSSLG FSGSSSSQFS PILAEGNNAG RGNVNVSELD  480
QIVQQCSTLF SSSNNSSQVT VVDSSSSSTE ISSSYQKDND DAFNLSVLLL NELHLESIKN  540
DQVKGKQAID SDKDTDIDFD LFLNENHFGT VNDDDKHNGD LVDLKFDGDG DGLNMASPEN  600
LSLDEDWENI VESLFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A5e-17106166464ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008232272.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008232272.10.0PREDICTED: two-component response regulator ORR21-like
TrEMBLA0A314Y8J00.0A0A314Y8J0_PRUYE; Two-component response regulator ORR21-like
STRINGXP_008232272.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2757122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-26response regulator 2