PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008230413.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 311aa    MW: 35068.6 Da    PI: 8.6053
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008230413.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like932.5e-29192245255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      rl Wt+eLH++Fve+++ LGG+ +AtPk+i+e+m+v+gLt+++vkSHLQkYRl
  XP_008230413.1 192 SRLSWTQELHTKFVEVLSMLGGPAEATPKQIREAMQVDGLTNDQVKSHLQKYRL 245
                     69***************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.914188248IPR017930Myb domain
SuperFamilySSF466891.4E-15189245IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.4E-25190246IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-24192246IPR006447Myb domain, plants
PfamPF002497.2E-8193244IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MGSTSNPLEL NSLDLALSLK PSYVPKSLNH LFSDLASIDN VPHKLSVLNE YLLKHQEELH  60
RVEEFKRDLP QCVLLLLDAI QTLSNEIEKL SGQDQFDACK NRGSCEDPVE RRSAFRKYKS  120
SSPPFYPRPR NQDHTSHDHK VKGKEPILMV PSPRRRFPCD LNMEANGSEL ELKPEPDPQP  180
QPEVPPPIWK HSRLSWTQEL HTKFVEVLSM LGGPAEATPK QIREAMQVDG LTNDQVKSHL  240
QKYRLNSLGV QPAASAKSSK RKAPFYFRDF WNPSASQQQL ESASNGGGGS SSRGNAEPEM  300
RKSKRTWLGD A
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008230413.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008230413.10.0PREDICTED: probable transcription factor KAN3
TrEMBLA0A314UPL20.0A0A314UPL2_PRUYE; Uncharacterized protein
STRINGXP_008230413.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148661012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.16e-20G2-like family protein