PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008229756.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 370aa    MW: 41515.1 Da    PI: 4.5936
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008229756.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1001.6e-31105159155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kprlrWtp LH++Fv+a++qLGG++kAtPk++l+ m+vkg+tl+h+kSHLQkYRl
  XP_008229756.1 105 KPRLRWTPHLHACFVDAINQLGGPHKATPKKLLQKMGVKGITLYHLKSHLQKYRL 159
                     79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015574.0E-23105160IPR006447Myb domain, plants
SuperFamilySSF466895.73E-15105159IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.6E-29105159IPR009057Homeodomain-like
PfamPF002493.8E-6107158IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MFHRGGGGGS GVPNHTYNSQ LLRAAALQPR EEEEEKERMV GCGFDYFGDD EQDFQGPPTP  60
TVTLSDDSVV VEGEEEEEEE EEEEEEEENL SHDLQTPSVL SSNFKPRLRW TPHLHACFVD  120
AINQLGGPHK ATPKKLLQKM GVKGITLYHL KSHLQKYRLG KYSVKEWKEV PETFSQDFEG  180
RSVSGTSVCS SRSQKKHSSK LIKKALTQTE VEEKLGLQIE AEKRLKLRQD AERRYMDYAL  240
DNACKKLADQ FLGSVAVDSA GVFRKDVAGL GTMVSIIPQK DQFLAYDITK ETSMLLSLED  300
QLGGFEAQRE AYHETEDHLI SHGNSENSSV EDLQILADDD KIMEQSLDND PAEAYLVLDT  360
AEMGTSSHRT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-19105162259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-19105162259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-19105162158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-19105162158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-19105162158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-19105162158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-19105162259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-19105162259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-19105162259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-19105162259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-19105162259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-19105162259Protein PHOSPHATE STARVATION RESPONSE 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1194203KKHSSKLIKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008229756.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008229756.10.0PREDICTED: myb family transcription factor APL-like isoform X2
TrEMBLA0A251Q2J30.0A0A251Q2J3_PRUPE; Uncharacterized protein
STRINGXP_008229755.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.14e-39G2-like family protein