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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_008227448.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
GRAS |
Protein Properties |
Length: 540aa MW: 60557.4 Da PI: 5.9235 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_008227448.1 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 424.8 | 7e-130 | 171 | 540 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
+++L++cA+a++++dl a++l++ l +++s +g+p+qRl ay++e+L+arl rs+s++yk+l+++ + +e +++++++++++P+ +f+++
XP_008227448.1 171 KDVLIHCAHAIAEDDLPTANSLMEVLGQMVSVSGEPIQRLGAYMLEGLRARLERSGSSIYKTLKCEVPT---GAELMSYMSVLFQICPYWRFAYM 262
789*****************************************************************9...9********************** PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
aN I ea+e+e r+HiiDf+i qG QW++L+q La +p+gpp++RiTgv++++s + l+ +g+rL+++A++ +vpfefn +a + ++
XP_008227448.1 263 SANVVIREALENEPRIHIIDFQIAQGSQWVPLIQDLARQPGGPPHIRITGVDDSQSAhaRGGGLHIVGQRLSQIANSWNVPFEFNN-AAMSGCEV 356
*****************************************************9988889999***********************.89999*** PP
GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
ele+Lr++pgEa+aVn+ + lh+++desvs++++rd++L+lvkslsPkv+++veqe+++n+++F+ rf+e ++yy+a+f+s+++ pr++++ri+
XP_008227448.1 357 ELENLRIQPGEAIAVNFPYVLHHMPDESVSTQNHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFFSRFVEMVDYYTAMFESIDVARPRDDKQRIS 451
*********************************************************************************************** PP
GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
E ++++r+ivn+vacegaer+erhe l+kW++rl++ F+p+pls k+++ +++ll++++++ yr++e +g+l+l+Wk+r+Lv+ SaWr
XP_008227448.1 452 AEMHCVARDIVNMVACEGAERVERHELLGKWKSRLTMDEFTPYPLSPKVTEAIRSLLKEFNGN-YRLQEANGALYLCWKQRALVTSSAWR 540
*************************************************************77.*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 540 aa
Download sequence Send
to blast |
MQTSQKHRST ASIHRLYHHQ PMQDIDPSIF QILENSVCSD TGSQGNNVSF QTYKEEYFTL 60 ESSPATTGFV ACDSPSAVSG LSNRSPFSSQ GSQSCLSDQH HSPDNTSGSP ISGCSVADDG 120 NGLRYKLREL EISLLGPESD IIVDSHYCCY KSDMPRWNRN EIAEMPNLNL KDVLIHCAHA 180 IAEDDLPTAN SLMEVLGQMV SVSGEPIQRL GAYMLEGLRA RLERSGSSIY KTLKCEVPTG 240 AELMSYMSVL FQICPYWRFA YMSANVVIRE ALENEPRIHI IDFQIAQGSQ WVPLIQDLAR 300 QPGGPPHIRI TGVDDSQSAH ARGGGLHIVG QRLSQIANSW NVPFEFNNAA MSGCEVELEN 360 LRIQPGEAIA VNFPYVLHHM PDESVSTQNH RDRLLRLVKS LSPKVMTLVE QESNTNTSPF 420 FSRFVEMVDY YTAMFESIDV ARPRDDKQRI SAEMHCVARD IVNMVACEGA ERVERHELLG 480 KWKSRLTMDE FTPYPLSPKV TEAIRSLLKE FNGNYRLQEA NGALYLCWKQ RALVTSSAWR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |