PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008226855.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 547aa    MW: 59844.9 Da    PI: 6.5871
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008226855.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.72.8e-29314372259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+  gC v+k+v+r+aed +++++tYeg+Hnh+
  XP_008226855.1 314 SDGCQWRKYGQKMAKGNPCPRAYYRCTMGtGCAVRKQVQRCAEDRTILVTTYEGHHNHP 372
                     7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-32298374IPR003657WRKY domain
SuperFamilySSF1182902.62E-27306374IPR003657WRKY domain
PROSITE profilePS5081129.448308374IPR003657WRKY domain
SMARTSM007746.6E-35313373IPR003657WRKY domain
PfamPF031063.1E-25315372IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MESAASDHSI HNCRSIEQPL LSPEFTAVDH DHHGKRVVDE LDFFADNKGR LMEMRDQTVE  60
VKEEGAHDHH GVGQEKQLPD VNTGLNLLTT YTSSDKSSMD DGTSSSHNME DKHRTNELAV  120
LQAELGRMNV ENQRLRVMIS QVNNNYQALQ VQIVTLMQRQ QNQKADHQTP EQHKMINNGS  180
VVVEEKQMMN GFNHIVPRQF MDMGRAEKDE RSQCPLEGCR SQDCSGSPPR NDIVESMECC  240
KSTSHVLHRD LSGRISTTNG GEDSPDQEFQ GWVPKKVSKM MSPRDVDQAS SETMSMIKKA  300
RVSVRARSEA SMISDGCQWR KYGQKMAKGN PCPRAYYRCT MGTGCAVRKQ VQRCAEDRTI  360
LVTTYEGHHN HPLPPAAMAM ASTTSAAASM LLSGSMPSAD GLISSNSFLA RSALPNCPPS  420
LATLSASAPF PTVTLDLTRT PTSSEMPLGQ PNQLPPSFPQ NMMSVPQILG QALSSQSKFS  480
VLDSFQGLDS ATHSLADKVN AATAAITADP NFTAALVAAI TSIVGNVHSN NNTNNNITTR  540
NNSDSNT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-22304374877Probable WRKY transcription factor 4
2lex_A6e-22304374877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008226855.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008226855.10.0PREDICTED: probable WRKY transcription factor 31 isoform X1
RefseqXP_016648424.10.0PREDICTED: probable WRKY transcription factor 31 isoform X2
SwissprotQ9XEC31e-119WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A251PP600.0A0A251PP60_PRUPE; Uncharacterized protein
STRINGXP_008226855.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-104WRKY family protein