PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_008225750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 221aa MW: 25965.1 Da PI: 7.6818 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 49.5 | 1.3e-15 | 10 | 140 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdk 90 f+FhPtd+e++ L k v + + + + ++++ d++ + e w++ + + + +++++yf ++ ++ + ++r++r + ++g+W++ k XP_008225750.1 10 AFHFHPTDQEIIRSILYKMVIEGEplnPSYHGIVHDEDLFGTkELWKIWEdygRDQLHDQDLYFLCQLKRINYCSSRTHRrIGREGTWSQRVAPK 104 69***************99766665755555679999*998857799964344434477899******9999998988886889*********** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ + + +g + L + + ++ + ++W+++ey+l XP_008225750.1 105 LIYDGNPNPIGSVRKLRYKN--PKSEHDAEWFLDEYSL 140 ****9999**********84..444459********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.27E-17 | 4 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.045 | 7 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.9E-11 | 10 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MANSRNVSLA FHFHPTDQEI IRSILYKMVI EGEPLNPSYH GIVHDEDLFG TKELWKIWED 60 YGRDQLHDQD LYFLCQLKRI NYCSSRTHRR IGREGTWSQR VAPKLIYDGN PNPIGSVRKL 120 RYKNPKSEHD AEWFLDEYSL FVGDDGHDQT TPGFDFVVCR LRRNHNKFDR IRASVHKKTN 180 KAPQQIHERK RKSMNVVINI DDEEEEEVHG CSSAKSHSCT L |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_008225750.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008225750.1 | 1e-167 | PREDICTED: NAC domain-containing protein 101-like | ||||
TrEMBL | A0A314XGU3 | 1e-142 | A0A314XGU3_PRUYE; NAC domain-containing protein 101-like | ||||
STRING | XP_008225750.1 | 1e-167 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12591 | 6 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.1 | 1e-08 | Arabidopsis NAC domain containing protein 87 |