PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_008225589.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | BES1 | ||||||||
Protein Properties | Length: 175aa MW: 18662.6 Da PI: 9.3326 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 122.2 | 6.8e-38 | 3 | 140 | 3 | 135 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspesslq. 95 ++ +++ E+E++k RER+RRai++ki+ GLR++G+y+l raD+neVl+ L+ eAGw+ve+DGttyr+ s + ++ g +as +s XP_008225589.1 3 GTHGRSESEKEKTKMRERQRRAITTKIFHGLRKHGGYRLSSRADINEVLRHLASEAGWLVEPDGTTYRRRSPNVsNCCSVCGGVPKASATSAAAa 97 55667889************************************************************777666666777777777777766552 PP DUF822 96 ..ssl.kssalaspvesysaspksssfpspssldsislasaas 135 ++ +s+ + +s asp+ss p+ ++ s ++ +++ XP_008225589.1 98 aaATPsSSMGMGCCESSTTASPTSSRLPAFNNNTSGTTDTNNN 140 2122202233444455555666666666555544443333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.6E-35 | 4 | 135 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence Send to blast |
MAGTHGRSES EKEKTKMRER QRRAITTKIF HGLRKHGGYR LSSRADINEV LRHLASEAGW 60 LVEPDGTTYR RRSPNVSNCC SVCGGVPKAS ATSAAAAAAA TPSSSMGMGC CESSTTASPT 120 SSRLPAFNNN TSGTTDTNNN SVSVYSAMYV YEGGLHNHQL HEARASNNTS PSHCP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_008225589.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008225589.1 | 1e-127 | PREDICTED: BES1/BZR1 homolog protein 4 isoform X2 | ||||
TrEMBL | M5WL98 | 3e-87 | M5WL98_PRUPE; Uncharacterized protein | ||||
STRING | XP_008225589.1 | 1e-126 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 2e-21 | beta-amylase 7 |