PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008224665.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 306aa    MW: 33843 Da    PI: 6.6797
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008224665.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1085.1e-341872155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_008224665.1 18 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 72
                    79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.4851575IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.1E-321773IPR009057Homeodomain-like
SuperFamilySSF466897.53E-181772IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-251873IPR006447Myb domain, plants
PfamPF002491.2E-92071IPR001005SANT/Myb domain
PfamPF143791.6E-23104150IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDPINGGNSL NNPNLASKQR LRWTHELHER FVDAVAQLGG PDRATPKGVL RVMGVQGLTI  60
YHVKSHLQKY RLAKYLPDSS SDGKKADKKE PGDVLSNLDG SSGMQITEAL KLQMEVQKRL  120
HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR LSGVRSEAPG SGHLARLSDD NCPESDNKTD  180
PATPAPTSEC PLQDKAAKEC TPAKSLSIDE SFSSHHEPLT PDSACQVDSP AESPKAERSM  240
KKRRVIMGEA FADPEVVLTH QILESSLNSS YQQAHTTFLP REQFDPSSGI SFRNENILEK  300
VAGSDM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-241875158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-241875158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-241875158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-241875158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008224665.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFR8285570.0FR828557.1 Rosa hybrid cultivar mRNA for putative MYB transcription factor (myb6 gene), cultivar Yellow Island.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008224661.10.0PREDICTED: protein PHR1-LIKE 1 isoform X1
RefseqXP_008224662.10.0PREDICTED: protein PHR1-LIKE 1 isoform X1
RefseqXP_008224663.10.0PREDICTED: protein PHR1-LIKE 1 isoform X1
RefseqXP_008224664.10.0PREDICTED: protein PHR1-LIKE 1 isoform X1
RefseqXP_008224665.10.0PREDICTED: protein PHR1-LIKE 1 isoform X1
RefseqXP_016648589.10.0PREDICTED: protein PHR1-LIKE 1 isoform X1
SwissprotQ9SJW01e-136PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A314YHJ50.0A0A314YHJ5_PRUYE; Protein PHR1-LIKE 1 isoform X1
STRINGXP_008224661.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-114G2-like family protein