PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008224660.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 291aa    MW: 31737.9 Da    PI: 6.996
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008224660.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.43.2e-333589155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprlrWt +LHerFv+av+qLGGs kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  XP_008224660.1 35 KPRLRWTADLHERFVDAVSQLGGSSKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 89
                    79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-313290IPR009057Homeodomain-like
PROSITE profilePS512949.2953292IPR017930Myb domain
SuperFamilySSF466891.77E-163589IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-233589IPR006447Myb domain, plants
PfamPF002497.8E-83788IPR001005SANT/Myb domain
PfamPF143793.0E-15116161IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MFPRLMQAPH EGIVGEEDMQ GHRGDPCLVL TSDPKPRLRW TADLHERFVD AVSQLGGSSK  60
ATPKAIMRTM NVKGLTLFHL KSHLQKYRLA SYLLESPGTG NSSPNLPTSD LNEGYEVKEA  120
LRAQMEVQSK LHVQVEAEKH LQIRQDAERR YMAMLERACK MLADQFIGGS VTDTDSHKCH  180
GLGNKNTKGP SLDPLGFYSL QSTDVAGVHG PEEEVPTSIH TQRADCSTES CLTSHESPGG  240
LTLEGSPGGG KKRMLSLDSA AASLIWGEAK VRTQEINVAA VNPHGIARYG M
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-213592259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-213592259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A8e-213592158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-213592158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-213592158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-213592158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-213592259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-213592259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-213592259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-213592259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-213592259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-213592259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008224660.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934050.0KT893405.1 Prunus persica cultivar Jinliuzaohong Myb family transcription factor APL (APL) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008224660.10.0PREDICTED: myb family transcription factor APL-like isoform X2
TrEMBLA0A251PDJ00.0A0A251PDJ0_PRUPE; Uncharacterized protein
STRINGXP_008224659.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.16e-57G2-like family protein