PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221991.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 421aa    MW: 46023.6 Da    PI: 7.6984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221991.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.7e-1755104255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  XP_008221991.1  55 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 104
                     59*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.11555112IPR001471AP2/ERF domain
SMARTSM003806.1E-3355118IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-2955111IPR001471AP2/ERF domain
CDDcd000187.19E-3055111No hitNo description
SuperFamilySSF541714.32E-2155112IPR016177DNA-binding domain
PfamPF008474.8E-1155104IPR001471AP2/ERF domain
PRINTSPR003672.5E-95667IPR001471AP2/ERF domain
PRINTSPR003672.5E-97894IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MEEAFRRLNG FTRSTEPDPI SDPPRKSTTA TPTNKRTLRD TTTAAGTGTG GGAMRYRGVR  60
RRPWGRYAAE IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGLKARTN FVYPSSPPHT  120
AVNDHLLPPF SFHKQSQPSV KSRNGYGAGH SSSWPSVTPF TQYPTTNNND AVASPLNMLF  180
FRNFINSSPN PSPVYNQFPY NISGSSSSAA LVNTASCGQP HETNMSASTN FSSTSTGSSS  240
SMTVATSVPL MDITTSSTTP TTHDDHSDFF AVEPSDSGLL EEVIQRFFPK PTSKKSMDPP  300
KSADYGRHNM NSIPSSSSQA SFVSSNQAPP FDGPTKNHPH QHGGVCYNFE ELLPQPQQLG  360
NSFSVGMDYQ PQVSQTTQAV PFYNDHVPIN VQLGGQDYSM VDNNMFQYPE FMGGFAARVQ  420
N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-2045111471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008221991.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP1649951e-58KP164995.1 Malus domestica AP2/ERF domain transcription factor (EBB1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221991.10.0PREDICTED: ethylene-responsive transcription factor ESR2
TrEMBLM5XJ630.0M5XJ63_PRUPE; Uncharacterized protein
STRINGXP_008221991.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.14e-14DORNROSCHEN-like