PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221664.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 633aa    MW: 68894.1 Da    PI: 7.0008
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221664.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.44e-30277336159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  XP_008221664.1 277 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCADDMSILITTYEGSHNHP 336
                     58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-31262338IPR003657WRKY domain
SuperFamilySSF1182902.48E-27271338IPR003657WRKY domain
PROSITE profilePS5081128.851272338IPR003657WRKY domain
SMARTSM007741.2E-36277337IPR003657WRKY domain
PfamPF031067.4E-27278336IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    Send to blast
MEMPKRRSKA MENNNTEENS FLGNTPVEDK TKKSDGHDEE GTSMEMEISK GGRGWLAEPE  60
QTNTLMPSSS AGKDRALIKH PQEDELQSAK AEMGEVKEEN ERLKLLLSRI VRNYQSLQMH  120
FHGLLQKDEE AKKSMDPSSS ARDQSNEQDE EADELVSLSL GRSSSIDQPR KDEQMKKTSH  180
FSKNGKGDDE EGLNGAGLAL ELGCRFEPAA DQSTEVVMKN SSSDNSCGDP KEDDPTEIWP  240
PGKTSKTTRS GDDEVSQQTH LKKARVSIRA RCDAPTMNDG CQWRKYGQKI AKGNPCPRAY  300
YRCTVSPSCP VRKQVQRCAD DMSILITTYE GSHNHPLPMS ATAMASTTSA AASMLLSHSS  360
TSQQGHTATA PISASTNLQG LNFSTSTLSQ NSRLPQHFYF PNSSISTTNS HPTITLDLTA  420
PSPSHFGRFP AAVFSSNPRY PSTCLNFSSS PSSSLDHNNH TLQLQAPWNN NNHTAAGYLN  480
YGNRVLNQVG SALSMGKQSI FQEPNNLYQS YIQNQKPPPP PPPPSPPPLP PPPHQQLMLT  540
ETIASATKAI TSNPKFQSAL AAALTSFVGT NNGGSATTGV RENHHHHQHQ SSTSTESASG  600
LKLKWAESLT TNPIYPPSPN GIGCASSYLN KSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-19264338174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008221664.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221664.10.0PREDICTED: probable WRKY transcription factor 61 isoform X2
TrEMBLA0A314YZG50.0A0A314YZG5_PRUYE; Putative WRKY transcription factor 61 isoform X1
STRINGXP_008221663.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.17e-70WRKY DNA-binding protein 72