PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221663.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 643aa    MW: 69944.3 Da    PI: 6.9069
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221663.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.1e-30287346159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  XP_008221663.1 287 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCADDMSILITTYEGSHNHP 346
                     58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-31272348IPR003657WRKY domain
SuperFamilySSF1182902.48E-27281348IPR003657WRKY domain
PROSITE profilePS5081128.851282348IPR003657WRKY domain
SMARTSM007741.2E-36287347IPR003657WRKY domain
PfamPF031067.6E-27288346IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 643 aa     Download sequence    Send to blast
MEMPKRRSKA MENNNTEENS FLGNTPVEDK TKKSDGHDEE GTSMEMEISK SSSSMDITIQ  60
GGRGWLAEPE QTNTLMPSSS AGKDRALIKH PQEDELQSAK AEMGEVKEEN ERLKLLLSRI  120
VRNYQSLQMH FHGLLQKDEE AKKSMDPSSS ARDQSNEQDE EADELVSLSL GRSSSIDQPR  180
KDEQMKKTSH FSKNGKGDDE EGLNGAGLAL ELGCRFEPAA DQSTEVVMKN SSSDNSCGDP  240
KEDDPTEIWP PGKTSKTTRS GDDEVSQQTH LKKARVSIRA RCDAPTMNDG CQWRKYGQKI  300
AKGNPCPRAY YRCTVSPSCP VRKQVQRCAD DMSILITTYE GSHNHPLPMS ATAMASTTSA  360
AASMLLSHSS TSQQGHTATA PISASTNLQG LNFSTSTLSQ NSRLPQHFYF PNSSISTTNS  420
HPTITLDLTA PSPSHFGRFP AAVFSSNPRY PSTCLNFSSS PSSSLDHNNH TLQLQAPWNN  480
NNHTAAGYLN YGNRVLNQVG SALSMGKQSI FQEPNNLYQS YIQNQKPPPP PPPPSPPPLP  540
PPPHQQLMLT ETIASATKAI TSNPKFQSAL AAALTSFVGT NNGGSATTGV RENHHHHQHQ  600
SSTSTESASG LKLKWAESLT TNPIYPPSPN GIGCASSYLN KSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-19274348174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008221663.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221663.10.0PREDICTED: probable WRKY transcription factor 61 isoform X1
TrEMBLA0A314YZG50.0A0A314YZG5_PRUYE; Putative WRKY transcription factor 61 isoform X1
STRINGXP_008221663.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-69WRKY DNA-binding protein 72