PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221271.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 435aa    MW: 46710.7 Da    PI: 9.6111
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221271.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.3e-05195217223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ Cg+ F+  ++L++H+   H
  XP_008221271.1 195 VCSQCGEIFPKMDSLEHHQAIrH 217
                     8******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.829194222IPR007087Zinc finger, C2H2
PROSITE patternPS000280194217IPR007087Zinc finger, C2H2
SuperFamilySSF563992.21E-27219431No hitNo description
Gene3DG3DSA:3.90.228.102.6E-15226431IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MALLTFVPEA TEPKNKKKAP PPSKRRQKQS SSSKKQQNPP SSSSSSWDQI KNLLTCKQIE  60
GSRVHDPSKN HNIANGGAGA AAAGYSKLGS SCSSICSFRD VVHGNTRVVH RADNSPESSS  120
LGQETGLLGR KHVTRSSTRS SSSRSNATGT GAAYNTTSSS SSSRGMQFRK LSGCYECHMI  180
VDPSRYPIPR SSVCVCSQCG EIFPKMDSLE HHQAIRHAVS ELGVEDSGRN IVEIIFKSSW  240
QKKDIPICKI ERILKVHNTQ RTIQRFEDCR DAVKNRALGT TRKNPRCAAD GNELLRFHCA  300
SISCTLGARG SSSLCGSVPG CGVCTIIRHG FQGKAGGEGG KGVRTTASSG RAHDSLSCTD  360
GRRAMLVCRV IAGRVRRIAD DAPTEEDALS SLSAPGSYDS VAGFAGLYSN LEELVVYNPR  420
AILPCFVVIY QALES
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008221271.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221271.10.0PREDICTED: uncharacterized protein LOC103321258
TrEMBLA0A314ZTL20.0A0A314ZTL2_PRUYE; Uncharacterized protein
STRINGXP_008221271.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103413037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-163C2H2-like zinc finger protein