PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008219474.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 362aa    MW: 40980.6 Da    PI: 4.1911
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008219474.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.98e-09296343653
                     S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                     +++k  +e+Le++++k++ p+ +++  + + ++L+ ++V  WF  +R 
  XP_008219474.1 296 RLKKAHVETLESVYRKTKRPTNAMISSIVHVTNLPRKRVVKWFEDKRS 343
                     5778899*************************************9996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.442288348IPR001356Homeobox domain
SuperFamilySSF466895.13E-8294345IPR009057Homeodomain-like
CDDcd000867.77E-6294342No hitNo description
SMARTSM003895.1E-4294352IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.1E-7296343IPR009057Homeodomain-like
PfamPF000462.2E-6296343IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002229Biological Processdefense response to oomycetes
GO:0009414Biological Processresponse to water deprivation
GO:0009682Biological Processinduced systemic resistance
GO:0009787Biological Processregulation of abscisic acid-activated signaling pathway
GO:0010118Biological Processstomatal movement
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000071Biological Processregulation of defense response by callose deposition
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MAFASALNTP KGLHCLTLPS SRNERPPTSL ILPRQFPARF LSTLALARRR NQRTEVASSK  60
PKINKKILAK KEVKDEEDED VDEDAIDALF RLLEEDLKND DASLDDEDLT EEELAKLEQE  120
VAEALGIVDD EEDEDEDEEA DDDDDEADED DDDDVVIEID AQEEEVDDDD DDDEEEEEEK  180
ESPVKLKTWQ LRRLAAALKV GRRKTSIKIL AAELCLDRPV VLELLRNPPP SLLMMCAALP  240
DEPAPTISVS QTMPVETVVE TTVETVVETT TETSEVETTV NRPIHVMQQK FSAQKRLKKA  300
HVETLESVYR KTKRPTNAMI SSIVHVTNLP RKRVVKWFED KRSEDGVTDS RLPYRRPAPN  360
TA
Functional Description ? help Back to Top
Source Description
UniProtMay modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity). Homeodomain transcription factor that mediates jasmonic acid (JA)-mediated COI1-dependent and abscisic acid (ABA)-mediated PMR4-dependent resistance to infection by necrotrophic fungal pathogens (e.g. B.cinerea and P.cucumerina) and bacterial pathogens (e.g. P.syringae DC3000); this resistance involves at least callose deposition (PubMed:15923348, PubMed:20836879, PubMed:21564353). Required for the P.fluorescens WCS417r-triggered JA-dependent induced systemic resistance (ISR) against both P.syringae DC3000 and H.arabidopsidis (PubMed:20836879). Negative regulator of the ABA-dependent drought resistance (PubMed:19175769). {ECO:0000250|UniProtKB:Q70Z19, ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769, ECO:0000269|PubMed:20836879, ECO:0000269|PubMed:21564353}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008219474.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Constitutively expressed in healthy plants but repressed in response to infection by necrotrophic fungi (PubMed:15923348). Repressed by drought and abscisic acid (ABA) (PubMed:19175769). {ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008219473.10.0PREDICTED: protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
RefseqXP_008219474.10.0PREDICTED: protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
RefseqXP_016647877.10.0PREDICTED: protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
SwissprotQ8H0V56e-68OCP3_ARATH; Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBLA0A314UH431e-175A0A314UH43_PRUYE; Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
STRINGXP_008219473.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.13e-65overexpressor of cationic peroxidase 3
Publications ? help Back to Top
  1. García-Andrade J,Ramírez V,López A,Vera P
    Mediated plastid RNA editing in plant immunity.
    PLoS Pathog., 2013. 9(10): p. e1003713
    [PMID:24204264]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Gamir J,Pastor V,Kaever A,Cerezo M,Flors V
    Targeting novel chemical and constitutive primed metabolites against Plectosphaerella cucumerina.
    Plant J., 2014. 78(2): p. 227-40
    [PMID:24506441]