PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008219098.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 173aa    MW: 19105.3 Da    PI: 5.2996
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008219098.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-191565155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr +k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++ a++ ++g
  XP_008219098.1 15 SSYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 65
                    67*****999.**********8...325***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.05E-221574IPR016177DNA-binding domain
PfamPF008473.4E-121565IPR001471AP2/ERF domain
CDDcd000181.37E-231575No hitNo description
Gene3DG3DSA:3.30.730.102.6E-321674IPR001471AP2/ERF domain
SMARTSM003807.1E-401679IPR001471AP2/ERF domain
PROSITE profilePS5103223.6831673IPR001471AP2/ERF domain
PRINTSPR003673.4E-101728IPR001471AP2/ERF domain
PRINTSPR003673.4E-103955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MGEPNSSNAY GAATSSYRGV RKRKWGKWVS EIREPGTKTR IWLGSFETPE MAAAAYDVAA  60
LHFRGREARL NFPELVNSLP RPASSNAEDI RMAAHEAALR LRSSPAAEAH EAGSSSSNVG  120
PVTVRLSPSQ IQAINESPLD SPKMWMQMSE SMMFSGGFED QWEDMQNDSL WDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-171278168ATERF1
3gcc_A1e-171278168ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008219098.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008219098.11e-124PREDICTED: ethylene-responsive transcription factor ERF021-like
SwissprotQ9C9I24e-67ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLM5XFS11e-122M5XFS1_PRUPE; Uncharacterized protein
STRINGXP_008219098.11e-124(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.17e-67ERF family protein