PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008218853.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 278aa    MW: 30359.6 Da    PI: 5.0133
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008218853.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.33.9e-14197251457
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkeva 57 
                      +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L ++e+e+ k+  +
  XP_008218853.1 197 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEENARLvREEAEQKKERFK 251
                     689**************************************94455555554444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.0E-11194258IPR004827Basic-leucine zipper domain
PfamPF001709.9E-13196253IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.174196248IPR004827Basic-leucine zipper domain
CDDcd147077.21E-19198247No hitNo description
SuperFamilySSF579593.63E-10198249No hitNo description
Gene3DG3DSA:1.20.5.1704.8E-13199255No hitNo description
PROSITE patternPS000360201216IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MMASSKMVVS TTNSDLPHRE SSICSLSTLM ADDDDQNDEQ QSMTMDDILK NIYTTATTTT  60
TTNDMDDNNH HHAEPRTVDE VWKEIVAGGV GVEEAAAEGE GGGDQVRAAA PEEMTLEDFL  120
TRAGAVREDD VTVGAGGVQI GYGQFQVQPP PAPAQGQVGY GNGTTTSTSG GGGGGGGGGR  180
AGKRRAVQEA PLDKATQQKQ RRMIKNRESA ARSRERKQAY TVELESLVTQ LEEENARLVR  240
EEAEQKKERF KRLMENLIPI VEQRRPPRVL RRVHSVHW
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008218853.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2296843e-33KP229684.1 UNVERIFIED: Boehmeria nivea Basic leucine zipper transcription factor-like (bZIP18) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008218853.10.0PREDICTED: G-box-binding factor 4-like
TrEMBLA0A251RJI41e-144A0A251RJI4_PRUPE; Uncharacterized protein
STRINGXP_008218853.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-34bZIP family protein