PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PSME_00056943-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family | bZIP | ||||||||
Protein Properties | Length: 126aa MW: 15067.4 Da PI: 10.6389 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25 | 4.2e-08 | 30 | 65 | 10 | 45 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 ++kN e+ +rsR RK++ +eL+ + L aeNk++ PSME_00056943-RA 30 MEKNGESVKRSRVRKQQHFDELRAHMVHLMAENKEY 65 89*******************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 4.15E-5 | 30 | 65 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.3E-6 | 30 | 64 | No hit | No description |
SuperFamily | SSF57959 | 3.02E-5 | 58 | 106 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MFSNIESAKR SQLRKQQHLD ELRAQMVHLM EKNGESVKRS RVRKQQHFDE LRAHMVHLMA 60 ENKEYAMRSR IQKQQNLDEL TAQKVHIIVE NREILKKRNV ASKHYVHITE DNFLLISKVV 120 ELSQKL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 1e-11 | basic leucine-zipper 44 |