PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00045189-RA
Organism
Pseudotsuga menziesii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family BES1
Protein Properties Length: 146aa    MW: 16119.4 Da    PI: 10.928
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00045189-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822109.36.5e-34475376
            DUF822  3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76
                      ++r p+ kErE n +RERrRRa aaki+aGLR + n++l  ++D neVlkA c+eAGw+v++D ttyr     +
  PSME_00045189-RA  4 GRRLPSSKEREENTKRERRRRAKAAKIFAGLRFYRNFNL--HCDSNEVLKAVCAEAGWIVHPDRTTYRPNADCT 75
                      6899*********************************98..9**************************655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.1E-31476IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MTWGRRLPSS KEREENTKRE RRRRAKAAKI FAGLRFYRNF NLHCDSNEVL KAVCAEAGWI  60
VHPDRTTYRP NADCTISSSP PAVAVTYESE KGSLIPWLKG LGSNRLAAQR TLPPLQITPS  120
GHGSAPVTPP LTPPIVTPPV SASRSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-11569371437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-11569371437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-11569371437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-11569371437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352718.12e-25PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV882e-17BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLD5ACJ31e-53D5ACJ3_PICSI; Uncharacterized protein
STRINGXP_009352718.17e-25(Pyrus x bretschneideri)
STRINGPP1S334_66V6.12e-25(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.13e-15BES1/BZR1 homolog 4