PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00003148-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family G2-like
Protein Properties Length: 153aa    MW: 17591.6 Da    PI: 6.5985
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00003148-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like284.8e-09110131122
           G2-like   1 kprlrWtpeLHerFveaveqLG 22 
                       kpr++W+ eLH++Fv av+qLG
  PSME_00003148-RA 110 KPRVVWSVELHQQFVCAVNQLG 131
                       79*******************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.0E-12164No hitNo description
PROSITE profilePS5011015.436139IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521722.42E-8147IPR011006CheY-like superfamily
Gene3DG3DSA:1.10.10.605.5E-9109135IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MSADGETSVV MKGIKHGACD YLLKPVRIEA LKNIWQHVIR KKRNESKELE HSGSVDDSDR  60
HKKGSDDVEY ASSVNEGNNG MWKHSKKRKE AREEEDDGEQ DNDDSSNLKK PRVVWSVELH  120
QQFVCAVNQL GIDSKHNCHL HLIFNDYPLY FCL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010271366.13e-64PREDICTED: two-component response regulator ORR21-like isoform X1
RefseqXP_010271367.13e-64PREDICTED: two-component response regulator ORR21-like isoform X1
RefseqXP_010271368.15e-65PREDICTED: two-component response regulator ORR21-like isoform X2
SwissprotA2XE317e-50ORR21_ORYSI; Two-component response regulator ORR21
SwissprotQ8H7S77e-50ORR21_ORYSJ; Two-component response regulator ORR21
TrEMBLA0A443N9877e-67A0A443N987_9MAGN; Two-component response regulator ORR21-like protein isoform X1
STRINGXP_010271366.11e-63(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.21e-40response regulator 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]