PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf19586g00005.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Nin-like

Protein Properties

Length: 628aa MW: 70918 Da PI: 6.7851

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf19586g00005.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	47.8	2.8e-15	485	529	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 i+ e l+ +F ++++dAAk+ gv ++LKriCR y I RWP+ k Peinf101Scf19586g00005.1 485 GITREALECQFGKKLADAAKSFGVARSTLKRICRDYEIYRWPRQK 529 6999**************************************876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	12.355	467	557	IPR003035	RWP-RK domain
Pfam	PF02042	9.2E-14	486	529	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence Send to blast
NLSRVDTVLD HHTIRLRIRD VLERVNTQAT CLIQFWAPIN DSKGQLFLTT ADQPFGFNKK 60 LHHGFWLYRN LCLRTLISVD SETAEHNHGP PARVFQHGMA EFSPHVRYYT ITEYPLRDFA 120 MHNGVSSYWA LPIFEPSRHQ CIGVLEYVFE EDEDIKLHSF LDSCISNHKI VKRTGLSLIP 180 VRSAFPQQIK KYWEAFPGIK EGLEVTCKTH KIPFAQTWIP VLDSSRMLVF MTLPSTKFYC 240 EDMKDIHFFA MTGLSCVHQG EGLIGRVLST RGSCFCGDIT QLSIETYPLI PIARFAGLAT 300 CFAICLLARN SSYIVVEFLL PWDETLNRDP QSFLHELLAT MKEQYPGYIV GSGQELGEKL 360 SVEVIKTSPS DKLDMLEIGQ SQPILEALLD SVDGMQSDFL NQTSGLSNLD ADVGDNEREP 420 NGEAVDTVKS HHRLESGSEA ETVRLNSADQ VVEVEVDALA HQRINSLSTG SKEESRTKRI 480 EKEYGITREA LECQFGKKLA DAAKSFGVAR STLKRICRDY EIYRWPRQKK ENHVLSQCGS 540 LQAGDKHPAD SRGGNQLCID LSLGRYPSSV VTPKNLLVTM TETKNAMSIK VAYRNRTVRF 600 PLRLSSIKKD LEEEVEKRLI IPVGSSLI

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence Send to blast

NLSRVDTVLD HHTIRLRIRD VLERVNTQAT CLIQFWAPIN DSKGQLFLTT ADQPFGFNKK  60
LHHGFWLYRN LCLRTLISVD SETAEHNHGP PARVFQHGMA EFSPHVRYYT ITEYPLRDFA  120
MHNGVSSYWA LPIFEPSRHQ CIGVLEYVFE EDEDIKLHSF LDSCISNHKI VKRTGLSLIP  180
VRSAFPQQIK KYWEAFPGIK EGLEVTCKTH KIPFAQTWIP VLDSSRMLVF MTLPSTKFYC  240
EDMKDIHFFA MTGLSCVHQG EGLIGRVLST RGSCFCGDIT QLSIETYPLI PIARFAGLAT  300
CFAICLLARN SSYIVVEFLL PWDETLNRDP QSFLHELLAT MKEQYPGYIV GSGQELGEKL  360
SVEVIKTSPS DKLDMLEIGQ SQPILEALLD SVDGMQSDFL NQTSGLSNLD ADVGDNEREP  420
NGEAVDTVKS HHRLESGSEA ETVRLNSADQ VVEVEVDALA HQRINSLSTG SKEESRTKRI  480
EKEYGITREA LECQFGKKLA DAAKSFGVAR STLKRICRDY EIYRWPRQKK ENHVLSQCGS  540
LQAGDKHPAD SRGGNQLCID LSLGRYPSSV VTPKNLLVTM TETKNAMSIK VAYRNRTVRF  600
PLRLSSIKKD LEEEVEKRLI IPVGSSLI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016440594.1	1e-138	PREDICTED: protein NLP7-like isoform X1
TrEMBL	A0A1S3XL85	1e-137	A0A1S3XL85_TOBAC; protein NLP7-like isoform X1
STRING	XP_009783719.1	1e-137	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13981	7	11

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	9e-55	Nin-like family protein