PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf11322g00019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 323aa MW: 36353.9 Da PI: 6.6763 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 180.6 | 3.9e-56 | 5 | 131 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppGfrFhPtdeel+ +yL++kv++ ++++ +++++vd++k+ePwdLp+k++ ++kewyfFs rd+ky+tg r+nrat++gyWk+ Peinf101Scf11322g00019.1 5 LPPGFRFHPTDEELIIYYLTNKVSDVSFSA-RAFADVDLNKCEPWDLPAKASMGKKEWYFFSLRDRKYPTGLRTNRATEAGYWKT 88 79**************************99.88***************9999999****************************** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tgkdke+++ +g+lvg+kktLvfy+grapkg+kt+Wvmheyrle Peinf101Scf11322g00019.1 89 TGKDKEIFH-GGALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLE 131 *********.********************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.66E-64 | 3 | 151 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.495 | 5 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.2E-29 | 6 | 130 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
MEENLPPGFR FHPTDEELII YYLTNKVSDV SFSARAFADV DLNKCEPWDL PAKASMGKKE 60 WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFHGGA LVGMKKTLVF YRGRAPKGQK 120 TNWVMHEYRL ETELGLKPSK EEWVVCRVFQ KSSTVKKPQP TSSSPQYSLE SPNCDTNYTI 180 ANEFGDIHEL LNFNGIATPS SGINNNISLQ NYVNENMNMN LNLAAATNIV PLLPNLSSSL 240 LSSNLSSVNS LLLRALQSRV YNQPREAATV SDYYSLITPS SQGISHFGND FTNSNFAEGV 300 ASSSMVQQQQ VQEEPCKLDI DIW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-57 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-57 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-57 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-57 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-57 | 4 | 157 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-57 | 4 | 157 | 16 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF510212 | 0.0 | AF510212.1 Petunia x hybrida nam-like protein 15 (NH15) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009763274.1 | 1e-149 | PREDICTED: NAC domain-containing protein 77-like isoform X1 | ||||
Refseq | XP_016442160.1 | 1e-149 | PREDICTED: NAC domain-containing protein 79-like isoform X1 | ||||
TrEMBL | Q8LKN9 | 1e-180 | Q8LKN9_PETHY; Nam-like protein 15 (Fragment) | ||||
STRING | XP_009763274.1 | 1e-148 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA152 | 24 | 279 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18400.1 | 1e-102 | NAC domain containing protein 58 |