PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf08813g00003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB
Protein Properties Length: 284aa    MW: 32245.9 Da    PI: 8.5748
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf08813g00003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.29.1e-092469245
                              SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
           Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                              + WT+eE +++  a + +  +   +W ++a+ ++ g++ +++   + 
  Peinf101Scf08813g00003.1 24 NEWTQEENKKFESALAIYDERtpnRWFKVAALIP-GKSVYDVMKQYK 69
                              57********************************.*******98876 PP
2Myb_DNA-binding42.41.6e-13122166347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT+eE+ +++ + +++G+g+W+ I+r +   +t+ q+ s+ qky
  Peinf101Scf08813g00003.1 122 PWTEEEHRRFLMGLEKHGKGDWRNISRNFVISKTPTQVASHAQKY 166
                               8*****************************789***********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.9E-41870IPR009057Homeodomain-like
PROSITE profilePS512937.9052176IPR017884SANT domain
SMARTSM007173.4E-92274IPR001005SANT/Myb domain
SuperFamilySSF466893.45E-112476IPR009057Homeodomain-like
PfamPF002491.2E-62469IPR001005SANT/Myb domain
CDDcd001671.20E-72571No hitNo description
Gene3DG3DSA:1.10.10.601.0E-11113169IPR009057Homeodomain-like
PROSITE profilePS5129419.409115171IPR017930Myb domain
SuperFamilySSF466892.37E-16116170IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-17118170IPR006447Myb domain, plants
SMARTSM007171.2E-11119169IPR001005SANT/Myb domain
CDDcd001679.54E-10122166No hitNo description
PfamPF002491.1E-11122166IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
METLYPTTSF IQNPSWMMQE SKSNEWTQEE NKKFESALAI YDERTPNRWF KVAALIPGKS  60
VYDVMKQYKE LAADVSDIEA GLIPITGYLA LELIDDHRGV GVHQPFRKRG RSCDQERKKG  120
VPWTEEEHRR FLMGLEKHGK GDWRNISRNF VISKTPTQVA SHAQKYYLRQ LSGGKDKRRP  180
SIHDITTVNL SNIDLSDSSN LNNNRSPLSV EKSFTINPSR DLVTGCSNND YSNDGSALQL  240
AFGSSYNSSY PYELGSLSRG SYGTDIVNAN SQLQVQSTRY QIWG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106118RKRGRSCDQERKK
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF7378461e-116JF737846.1 Petunia axillaris isolate axil1175 CAPS marker MYB75 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009767350.11e-128PREDICTED: transcription factor DIVARICATA-like
RefseqXP_016475542.11e-128PREDICTED: transcription factor DIVARICATA-like
SwissprotQ8S9H77e-80DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A1S4AFU11e-127A0A1S4AFU1_TOBAC; transcription factor DIVARICATA-like
TrEMBLA0A1U7VZB71e-127A0A1U7VZB7_NICSY; transcription factor DIVARICATA-like
STRINGXP_009767350.11e-128(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-84Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]