PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf08787g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 312aa    MW: 36204.1 Da    PI: 7.4026
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf08787g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.31.2e-1721105898
                               -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                        B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                               s v++   l++p +f++++  +  ++ + tl+ + g +W+vk+      ++ v+++GW++F k+n+Lk g+f+vF++dg+++f++
  Peinf101Scf08787g00001.1  21 STVTS--ELRIPAHFLRHIPDE--SPDKATLKCLCGGTWNVKM--HSDVDGLVMQQGWEKFQKDNQLKYGEFLVFRYDGNMQFTY 99 
                               44443..49*******888644..5668***************..999999********************************99 PP

                               EEEEE- CS
                        B3  93 vvkvfr 98 
                               v k fr
  Peinf101Scf08787g00001.1 100 VPKSFR 105
                               988777 PP
2B356.26.5e-18991661788
                               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                        B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                               ++pk+f e+   +   ++t+ l++++g+ W+v++    ++g + +++GWk+Fv +n+LkegD++vF+l++ +
  Peinf101Scf08787g00001.1  99 YVPKSFREKLPRS--AKITVALYNSEGKDWKVNC--VAQRGYHAFSGGWKQFVTDNKLKEGDVCVFQLVNVD 166
                               6899998887544..5689***************..999999*************************98654 PP
3B340.45.1e-131652471098
                               HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                        B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                               v ++ + +lp +f++ehg     + t++l  ++   W+v l  +k ++ ++l +GW+eF + + ++   f++F++  +s+f  +v
  Peinf101Scf08787g00001.1 165 VDTNELKRLPDQFVQEHGDG--LQDTVRLIVPTDDFWNVGL--KKVGKLIWLHDGWQEFMEHHSIERYYFLTFEYGLNSCF--KV 243
                               55666679*********654..5669***************..999888**************************999***..88 PP

                               EEE- CS
                        B3  95 kvfr 98 
                               +vf+
  Peinf101Scf08787g00001.1 244 HVFD 247
                               8886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.2E-191198IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.16E-181198IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508637.4291282IPR003340B3 DNA binding domain
CDDcd100171.20E-131398No hitNo description
SMARTSM010195.4E-1015107IPR003340B3 DNA binding domain
PROSITE profilePS5086313.70483176IPR003340B3 DNA binding domain
PfamPF023627.7E-1699167IPR003340B3 DNA binding domain
SuperFamilySSF1019364.97E-1799166IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.4E-1799165IPR015300DNA-binding pseudobarrel domain
CDDcd100173.11E-1499168No hitNo description
SMARTSM010197.2E-7160249IPR003340B3 DNA binding domain
CDDcd100176.59E-12164247No hitNo description
SuperFamilySSF1019362.55E-15169248IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.3E-14172248IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508638.431199249IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MKKRNSLKID KRPIFYKIYN STVTSELRIP AHFLRHIPDE SPDKATLKCL CGGTWNVKMH  60
SDVDGLVMQQ GWEKFQKDNQ LKYGEFLVFR YDGNMQFTYV PKSFREKLPR SAKITVALYN  120
SEGKDWKVNC VAQRGYHAFS GGWKQFVTDN KLKEGDVCVF QLVNVDTNEL KRLPDQFVQE  180
HGDGLQDTVR LIVPTDDFWN VGLKKVGKLI WLHDGWQEFM EHHSIERYYF LTFEYGLNSC  240
FKVHVFDLTA AEIHYQLRSH GNAKLQDINQ DLSHGKEKIV GHDDGESSVE IVDPWETDEQ  300
GPEGAKRRKI AA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA85571529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.17e-22B3 family protein