PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf06583g00014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | GRAS | ||||||||
Protein Properties | Length: 226aa MW: 25084.1 Da PI: 5.1791 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 39.2 | 1e-12 | 169 | 221 | 3 | 55 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55 +lL +cA+a+++ d++ a + L+ +++ +s +gd+++R+a+yf+ AL+arl + Peinf101Scf06583g00014.1 169 SLLAQCAQAITNYDTRTAYERLKSIRKYSSRYGDATERMAHYFADALEARLGG 221 79************************************************965 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50985 | 12.338 | 141 | 226 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 3.6E-10 | 169 | 221 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MEEEDLENRP CMLQDSLALQ AAEKSFYDAL IEAYPSSSFE VVDSSAIARS QFSLNLRGEK 60 TDATEFIQHN CVNHSMVTQE GVLGEVIDKR RLEGGGKRCS SGDCCDTVEG PISKHLASFY 120 SDPPCCQSDQ PLEEKLAYKP LPGQSRMPKR GRPRANAKPV NTNAVDLWSL LAQCAQAITN 180 YDTRTAYERL KSIRKYSSRY GDATERMAHY FADALEARLG GTGIEL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA17136 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46600.1 | 3e-25 | GRAS family protein |