PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf06431g00032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 355aa MW: 40323.9 Da PI: 6.373 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.1 | 1.2e-17 | 134 | 187 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k Peinf101Scf06431g00032.1 134 KKRRLNLEQVKALERSFEVANKLEPERKMQLARALGLKPRQIAIWFQNRRARWK 187 4557899**********************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.03E-18 | 129 | 191 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 1.2E-16 | 132 | 193 | IPR001356 | Homeobox domain |
PROSITE profile | PS50071 | 16.487 | 133 | 189 | IPR001356 | Homeobox domain |
CDD | cd00086 | 6.09E-16 | 134 | 190 | No hit | No description |
Pfam | PF00046 | 6.4E-15 | 134 | 187 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 8.8E-19 | 136 | 196 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 1.8E-5 | 160 | 169 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 164 | 187 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 1.8E-5 | 169 | 185 | IPR000047 | Helix-turn-helix motif |
CDD | cd14686 | 0.00195 | 180 | 224 | No hit | No description |
Pfam | PF02183 | 7.6E-16 | 189 | 228 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence Send to blast |
MFSGTTGIMA FVPTTPEISI NFQTHEDNHH LPSTSTKVFP SSCIPHQDFN ANNNMFSGTT 60 GIMAFVPTTP EISINFQTHE DNHHLPSTST KVFPSSCVSS MLMRRSMCDN HQDLRVDHDE 120 MSDDDGSSHL LGEKKRRLNL EQVKALERSF EVANKLEPER KMQLARALGL KPRQIAIWFQ 180 NRRARWKTKQ LEKDYEILKR QYDALKADND SLKTQNKKLH SELQLLTLKN RESVGGTAPM 240 INLNKENDQG SWSNGSDDNN SIDVNLGTTT TTRTSSCDSP FYSNTQTNNK NVMFPVSSPM 300 PTASLAQFLQ SSSRQDDLQC HKIDPTVPDE GFCNMFTPVD DQTNYWPWPE QQQFN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 181 | 189 | RRARWKTKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009624441.1 | 1e-166 | PREDICTED: homeobox-leucine zipper protein ATHB-13-like isoform X1 | ||||
Refseq | XP_016464196.1 | 1e-166 | PREDICTED: homeobox-leucine zipper protein ATHB-13-like isoform X1 | ||||
Refseq | XP_016465587.1 | 1e-166 | PREDICTED: homeobox-leucine zipper protein ATHB-13-like | ||||
TrEMBL | A0A1S3ZIL5 | 1e-164 | A0A1S3ZIL5_TOBAC; homeobox-leucine zipper protein ATHB-13-like isoform X1 | ||||
TrEMBL | A0A1S3ZMJ3 | 1e-164 | A0A1S3ZMJ3_TOBAC; homeobox-leucine zipper protein ATHB-13-like | ||||
STRING | XP_009624441.1 | 1e-165 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA848 | 24 | 98 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 3e-62 | HD-ZIP family protein |