PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf05168g00074.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB
Protein Properties Length: 950aa    MW: 107231 Da    PI: 7.9422
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf05168g00074.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94.2e-07393435446
                               S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                               W t E++ l++av+q  + +W  Ia+ +g  Rt+ qc s++q 
  Peinf101Scf05168g00074.1 393 WDTVEEKSLLHAVQQKEMSDWIGIAASLGVCRTPFQCLSHYQR 435
                               *****************************99**********96 PP
2Myb_DNA-binding43.28.9e-14443487146
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                               r  WT+eEd +l  +v+ +G  +W  +a+ m  gRt+ qc +rw k
  Peinf101Scf05168g00074.1 443 RRDWTEEEDIRLCSLVETFGESNWQVVASFME-GRTGTQCSNRWIK 487
                               568*****************************.***********87 PP
3Myb_DNA-binding38.82.2e-12497554246
                               SSS-HHHHHHHHHHHHHTTTT..............-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..............tWktIartmgkgRtlkqcksrwqk 46 
                               g+W+++Ed++l+ av ++ ++               Wk+Ia+ ++ gRt  qc++rw +
  Peinf101Scf05168g00074.1 497 GKWSADEDKRLKVAVMLFYPKtwrnigqsvpwrtpIWKKIAQFVP-GRTHVQCRERWVN 554
                               89*****************99************************.***********87 PP
4Myb_DNA-binding47.54.3e-15564606347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                WT+eEd++l+ a+ ++G   W+++a++++  Rt++qc+ rw  +
  Peinf101Scf05168g00074.1 564 EWTEEEDLKLKSAIDEHGYS-WSKVAACVP-PRTDNQCRRRWMVL 606
                               7*****************99.*********.9**********865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007177.4300386IPR001005SANT/Myb domain
SuperFamilySSF466894.46E-8367437IPR009057Homeodomain-like
PROSITE profilePS500906.562385437IPR017877Myb-like domain
SMARTSM007170.077389439IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.7E-9393445IPR009057Homeodomain-like
SuperFamilySSF466892.58E-19421492IPR009057Homeodomain-like
PROSITE profilePS5129419.552438493IPR017930Myb domain
SMARTSM007175.1E-13442491IPR001005SANT/Myb domain
PfamPF002491.6E-12443487IPR001005SANT/Myb domain
CDDcd001672.81E-10446489No hitNo description
Gene3DG3DSA:1.10.10.601.7E-16446495IPR009057Homeodomain-like
SuperFamilySSF466891.47E-7480532IPR009057Homeodomain-like
PROSITE profilePS500908.931491556IPR017877Myb-like domain
SMARTSM007175.9E-10495558IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.0E-13496545IPR009057Homeodomain-like
PfamPF002491.0E-5497531IPR001005SANT/Myb domain
CDDcd001675.93E-7498556No hitNo description
SuperFamilySSF466895.72E-25536608IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-20546603IPR009057Homeodomain-like
PROSITE profilePS5129422.515557611IPR017930Myb domain
SMARTSM007174.8E-14561609IPR001005SANT/Myb domain
PfamPF002494.7E-14564605IPR001005SANT/Myb domain
CDDcd001671.08E-11564607No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 950 aa     Download sequence    Send to blast
MAFDSDDDFS GSDSDGGFQE DMEALKKACL LAGEDTDDLH PSSPTGNITG DHVTRTDDVI  60
TPPCSDADDD IELVRSIQER FALSTELREP LSLKPLYSIH PRGGSEFDDD DDGDDFETLR  120
AIQRRFAAYT DERTNAEEGF PACVDRTTHF SEGCSYDIAA RSQTLIEWHD DDSGAENTAV  180
SVNSSSFPKS AQAFVDAIKK NRSCQKMIRN KMMQVEARME ELKKLKERVK ILKSFQLTCR  240
KRMGRALSQK RDARVQLISL PKQRFSSKGK KLSAIHYGPP ENSHVASFKE ALTEFAVSLS  300
RKEWSKEERE KLAKGVKQQF QEMLLQHSVN LRSDQDGCSG ESGDLDDTIA SIRDLVNKIA  360
PETMRLFLPK VNWDQVASMW LNWGDPLIKH EGWDTVEEKS LLHAVQQKEM SDWIGIAASL  420
GVCRTPFQCL SHYQRSLNAS IIRRDWTEEE DIRLCSLVET FGESNWQVVA SFMEGRTGTQ  480
CSNRWIKSLH PARKRSGKWS ADEDKRLKVA VMLFYPKTWR NIGQSVPWRT PIWKKIAQFV  540
PGRTHVQCRE RWVNSLDPSL KLDEWTEEED LKLKSAIDEH GYSWSKVAAC VPPRTDNQCR  600
RRWMVLFPDE VPMLQEAKKI HREAFISNFV DREEQRPALK PDDLVPTHKL RDKAGCETTS  660
ANKKRKRRPR AGREDTTPRS DAICELEKQH SDGEEGFEQD FHDASKNRRP SKLRVRKTQN  720
FAPNDNVPDA SASSQVESII GDGNKCKRRK RTHLLMKKKA KNAALQESSS SFPNQSSSMT  780
AAEEADIRDS RKTNHIMDGR HSIRECDNQL KAIDNRPETT EDCTTLASFI SKSRAKGRLL  840
SSAKVVKHPE LGQSKTMADA DNNSSCTTLA SFISKSHAKR RSSSSAKVVK HPELGQSKTM  900
ADNTSSSISG HDGLGKTMTE DCTSSNGVVG AEVGDDMPLS LFMSRAKRKR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C3e-273936039155MYB PROTO-ONCOGENE PROTEIN
1h89_C3e-273936039155MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1662667KKRKRR
2746752KRRKRTH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2389742e-65AC238974.1 Solanum tuberosum clone RHPOTKEY152M21, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016482192.10.0PREDICTED: uncharacterized protein LOC107803091 isoform X2
TrEMBLA0A1S4AZS60.0A0A1S4AZS6_TOBAC; uncharacterized protein LOC107803091 isoform X2
STRINGXP_009770188.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA108762124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-152myb domain protein 4r1