PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf05020g00038.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 130aa    MW: 15310.5 Da    PI: 8.4726
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf05020g00038.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.66.6e-20471251599
                               -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                        B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                                l +p +f+++++++    kt  l+ + g+ W+++l  +k +++ + ++GWk+F k+++Lk+gDf++F++dg+++f  +v++f+k
  Peinf101Scf05020g00038.1  47 KLQVPPEFVKHISEE--AAKTALLKGPCGKYWNMQL--QKEGNKLFYQGGWKKFIKEQHLKDGDFLLFHYDGEMTF--HVRIFDK 125
                               4669*****777644..5679***************..**********************************9999..****996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019365.89E-2431125IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.0E-2331125IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086314.43833126IPR003340B3 DNA binding domain
CDDcd100173.79E-1834124No hitNo description
SMARTSM010198.9E-1736126IPR003340B3 DNA binding domain
PfamPF023627.8E-1845125IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MQRDFNKSTS RMKNWQEEMV GQSSSSSIPR DDSPCFYKII LNPQDEKLQV PPEFVKHISE  60
EAAKTALLKG PCGKYWNMQL QKEGNKLFYQ GGWKKFIKEQ HLKDGDFLLF HYDGEMTFHV  120
RIFDKCGLER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009613235.12e-52PREDICTED: B3 domain-containing protein Os01g0723500-like
RefseqXP_016501188.12e-52PREDICTED: B3 domain-containing protein Os01g0723500-like
TrEMBLA0A1S4CJ434e-51A0A1S4CJ43_TOBAC; B3 domain-containing protein Os01g0723500-like
STRINGXP_009613235.17e-52(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37792244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.13e-18B3 family protein