PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Peinf101Scf04642g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 122aa MW: 13987.2 Da PI: 5.9218 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 33.6 | 7.2e-11 | 43 | 99 | 42 | 98 |
TS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS B3 42 sgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 +W++kl +k + + +GW++Fv + gLkegD +vF+l + ++ + +v++++ Peinf101Scf04642g00001.1 43 GQIEWNMKL--NKLCAKRRFFDGWSKFVTDTGLKEGDGLVFELLeCNnKNVKSKVQILD 99 4479*****..66555555668********************65366677777777776 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd10017 | 9.12E-10 | 22 | 99 | No hit | No description |
SuperFamily | SSF101936 | 2.94E-10 | 36 | 91 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 7.7E-10 | 38 | 99 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 2.3E-8 | 38 | 98 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 10.433 | 46 | 101 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 122 aa Download sequence Send to blast |
VVLTDEYIPT KQPQLQQCKE TILPPKILQH LPVTVVPITI RNGQIEWNMK LNKLCAKRRF 60 FDGWSKFVTD TGLKEGDGLV FELLECNNKN VKSKVQILDG SFREELFQEL GEGTSDNRVD 120 IL |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1819 | 21 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G33280.1 | 1e-06 | B3 family protein |