PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf04155g01014.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB
Protein Properties Length: 979aa    MW: 107839 Da    PI: 5.1911
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf04155g01014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.6e-184692148
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                              +g+W++eEde+l+++v+ +G++ W+t+a+++  gR +kqc++rw+++l
  Peinf101Scf04155g01014.1 46 KGSWSKEEDEILIELVNTYGSKKWSTVAQHLA-GRIGKQCRERWHNHL 92
                              799*****************************.*************97 PP
2Myb_DNA-binding50.54.9e-1698140145
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                               + +WT+eE++ l++a++ +G++ W+  ++ ++ gRt++ +k++w+
  Peinf101Scf04155g01014.1  98 KEAWTQEEELALIRAHQIYGNK-WAELSKVLP-GRTDNAIKNHWN 140
                               579*******************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500905.239140IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.605.2E-122156IPR009057Homeodomain-like
PROSITE profilePS5129429.9854196IPR017930Myb domain
SuperFamilySSF466891.72E-3043139IPR009057Homeodomain-like
SMARTSM007177.0E-184594IPR001005SANT/Myb domain
CDDcd001671.35E-154892No hitNo description
PfamPF139212.6E-1849107No hitNo description
Gene3DG3DSA:1.10.10.603.5E-265799IPR009057Homeodomain-like
PROSITE profilePS5129420.36997147IPR017930Myb domain
SMARTSM007173.4E-1697145IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-21100147IPR009057Homeodomain-like
CDDcd001671.63E-12100140No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 979 aa     Download sequence    Send to blast
RTSGPKRRSR QWNAEEILLA AECFKDRTDV QCLHRWQKVL DPELVKGSWS KEEDEILIEL  60
VNTYGSKKWS TVAQHLAGRI GKQCRERWHN HLNPAINKEA WTQEEELALI RAHQIYGNKW  120
AELSKVLPGR TDNAIKNHWN SSVKKKLDSY WASGLLAQFP SLSNINQQSQ SIPTSSIKLI  180
HNSEDESVHQ DGIVKEEVSE CSQGSPFAGC SHSTSDLGNT SVHVRENDRM SEESLNKKNA  240
SSSAAPCSRN STPAFHDVSC SLPEVPTELV DSRFLQDNYS HDLGNSMGND WQFNRDDIPN  300
ISLEVIQESS GLFMHLLNCN ENHNMVPFSL QTLTGFGTAN AGNLVEGPYR PNEMFSSVDG  360
CRIIHPAEGI SQCSPYETGV NGNGEPEDSL IYQSSNFPIL ETRDMAPQNC NASSLHDFEA  420
SCHQAFSVHS QFSSENRSIM FGIASNHPHI SPLENPVQES FTSGCDGFIY PSESAAPADN  480
GSDNSFLSDR LDHTNDSCRL VSVNDLGSTT STTVQKGLLN ENTFVPEEQK DGGALCYEPP  540
RFPSLDVPFL SCDLIQSVSD TQQEYSPLGI RQLMMTSANC LTPLRLWDSP SRDDSPDAIL  600
KSAAKTFTWT PSILKKRHRH LVTPLSEKRC EKRLEKDFNQ ESFSNMTVEF SRPQDMFDES  660
ANEKASTEDK ENGHPSSEAG RKEEGDGVTG LSCCGNSERQ LDGGAHYRKE PHGKSAGAND  720
GMGNVKQPPG VLVELSSNDL FFSPDRVLVK CDRATSLSNK ALANHYARRL EAASNQVTVS  780
SSFETSCSSV GCSPGVRGKC RSSFVIATST ALENTAENSE NGFRAETESI FGETPFKRSI  840
ESPSAWKSPW FMNSFLSSPR CDAELAFEDI ALFMSPGDRS YDAIGLMKQL SEQTAASIAD  900
AHQILGNDTP ETILLQTNSK KQKADENCSL LASNAVSERR TLDFSECGGT PRAKGKGTTK  960
FDSGTSFSSP SSYLLKCCR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C2e-57614718159MYB PROTO-ONCOGENE PROTEIN
1h89_C2e-57614718159MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016546938.10.0PREDICTED: myb-related protein 3R-1-like
TrEMBLA0A2G2YI290.0A0A2G2YI29_CAPAN; Uncharacterized protein
STRINGSolyc11g071300.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31072448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.21e-175Homeodomain-like protein