PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03815g00013.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family ERF
Protein Properties Length: 231aa    MW: 25622.1 Da    PI: 4.5919
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03815g00013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.6e-182878256
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                              +y+GVr +k +g++v+eIr p++   r r++lg+++tae+Aa+a +aa  +l+ge
  Peinf101Scf03815g00013.1 28 KYRGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRGE 78
                              8*****999.**********933...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.23E-292787No hitNo description
SuperFamilySSF541713.27E-202886IPR016177DNA-binding domain
SMARTSM003803.9E-342891IPR001471AP2/ERF domain
PROSITE profilePS5103221.5092885IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-292886IPR001471AP2/ERF domain
PfamPF008471.7E-102878IPR001471AP2/ERF domain
PRINTSPR003676.9E-102940IPR001471AP2/ERF domain
PRINTSPR003676.9E-105167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MVKPERQTCH QDSCTLAQSS SSSSSSAKYR GVRKRKWGKY VSEIRLPNSR ERIWLGSYDT  60
AEKAARAFDA ALFCLRGETA KFNFPNNPPD ILNGRSMTPA EIQVAAAQYA NTDTDAGVPI  120
SNWNPRDNSD PSSSLSSSSE MFRAESPSVS VSGGVVQETE KTEMALENGF VDMFSSMGTT  180
NNVYDFGIFP GFDDFSGDYY VPPMPNVDTV EENYHNYDGF HLQGSSFLWN F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-182386973Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009624342.11e-114PREDICTED: ethylene-responsive transcription factor ERF017
TrEMBLA0A1S3XUX51e-113A0A1S3XUX5_TOBAC; ethylene-responsive transcription factor ERF017-like
STRINGXP_009624342.11e-114(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-56ERF family protein