PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03754g00004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 154aa    MW: 17669.5 Da    PI: 9.2133
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03754g00004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000122749123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              ++C+ C++ Fs+   L  H+ +H
  Peinf101Scf03754g00004.1 27 FECKTCNRQFSSFQALGGHMASH 49
                              89******************999 PP
2zf-C2H210.70.00167395123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              ++C++Cg  F+    L  H+r+H
  Peinf101Scf03754g00004.1 73 HECSICGIEFPIGQALGGHMRRH 95
                              78*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.35E-92595No hitNo description
PfamPF139124.3E-132651IPR007087Zinc finger, C2H2
SMARTSM003550.0232749IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.4082754IPR007087Zinc finger, C2H2
PROSITE patternPS0002802949IPR007087Zinc finger, C2H2
PfamPF139125.2E-107297IPR007087Zinc finger, C2H2
SMARTSM003550.227395IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.22473100IPR007087Zinc finger, C2H2
PROSITE patternPS0002807595IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MANCLMLLSR QENHFDTMMN TSPRRVFECK TCNRQFSSFQ ALGGHMASHK KPRIMGELNF  60
HQLPTSPPKQ KTHECSICGI EFPIGQALGG HMRRHRGIMN ENLQTPHDQH VPVVKKSNSR  120
RVLCLDLNLT PLENDLEFKL GKATPVVECY MRDR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009762518.11e-84PREDICTED: zinc finger protein ZAT11-like
RefseqXP_016447026.11e-84PREDICTED: zinc finger protein ZAT11-like
SwissprotQ9SLD43e-36ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A1S3Y4E92e-83A0A1S3Y4E9_TOBAC; zinc finger protein ZAT11-like
TrEMBLA0A1U7V8042e-83A0A1U7V804_NICSY; zinc finger protein ZAT11-like
STRINGXP_009762518.14e-84(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.11e-38C2H2 family protein