PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03539g00035.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 367aa    MW: 42619.2 Da    PI: 4.4712
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03539g00035.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.32.7e-1329893195
                              .--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                        B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                              + + ++ l+d+ g+ W + l   k  +  ++++GW +F ++n ++ gDf++F +dg+  f   +k
  Peinf101Scf03539g00035.1 29 KLPEKVALRDKYGNMWPIGL--AKIERDLYFQEGWDKFTEENSVENGDFFIFDYDGNGVFD--FK 89
                              25668***************..*********************************988774..33 PP
2B3361.2e-11265344990
                               HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                        B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                               ++ ++++l++p + +++++++   + ++t++d+ gr++e +l+++k + r++lt+GW + ++ n ++ +D ++ ++++   ++
  Peinf101Scf03539g00035.1 265 HAKRRDMLYIPADVLKDYNIE--LPSKMTIRDSAGREFEARLKIWKDG-RIWLTGGWGRLCRWNLVEKKDRCICEFVRGkGKR 344
                               567899************866..6779***************999996.89**********************9988653444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.0E-14996IPR015300DNA-binding pseudobarrel domain
CDDcd100172.31E-91191No hitNo description
SuperFamilySSF1019361.39E-141196IPR015300DNA-binding pseudobarrel domain
SMARTSM010192.0E-81194IPR003340B3 DNA binding domain
PfamPF023628.7E-113086IPR003340B3 DNA binding domain
PROSITE profilePS5086312.6333394IPR003340B3 DNA binding domain
SuperFamilySSF1019367.65E-17253341IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.4E-16253353IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.996257356IPR003340B3 DNA binding domain
CDDcd100178.18E-9258343No hitNo description
SMARTSM010190.0016260356IPR003340B3 DNA binding domain
PfamPF023626.3E-10265346IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MGDSKKKEKG FFKTFNPKTS SQRLYKNGKL PEKVALRDKY GNMWPIGLAK IERDLYFQEG  60
WDKFTEENSV ENGDFFIFDY DGNGVFDFKL LGRTGCQKRG AGGLKSAVKS EDEEEEEEEM  120
NKHQNSEEPK VMNFDMDSDS IISSSDSDED YMVEEDDEED EEYEVAEEET EDEATEEEEA  180
SEEEEEANEK TVTLKRKAPP SKEEEEETAE EEEENEMQVI LESKGPHSKA KETKKREFVD  240
YYGADIFKSG LATQPKNPYF VARVHAKRRD MLYIPADVLK DYNIELPSKM TIRDSAGREF  300
EARLKIWKDG RIWLTGGWGR LCRWNLVEKK DRCICEFVRG KGKRGLYLQV QVLHEEQLPT  360
AARKNNK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006351837.11e-114PREDICTED: B3 domain-containing protein At5g60140-like
TrEMBLM1AQ141e-112M1AQ14_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000276731e-113(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10912264
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60140.19e-14B3 family protein