PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03438g00029.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 250aa    MW: 28012.9 Da    PI: 4.7909
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03438g00029.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.6e-141456148
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                              +g+WT+eEd  lv +v+++G+g+W++    ++ + t++++k++w+++l
  Peinf101Scf03438g00029.1 14 KGPWTPEEDIMLVSYVQEHGPGNWRA----VP-NSTDNDIKNYWNTHL 56
                              79************************....55.5566********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.3E-20563IPR009057Homeodomain-like
SuperFamilySSF466891.36E-14862IPR009057Homeodomain-like
PROSITE profilePS5129419.495960IPR017930Myb domain
SMARTSM007172.7E-101358IPR001005SANT/Myb domain
PfamPF002499.8E-131456IPR001005SANT/Myb domain
CDDcd001672.78E-101655No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MGRPPCCDKI GVKKGPWTPE EDIMLVSYVQ EHGPGNWRAV PNSTDNDIKN YWNTHLKKKL  60
KKLEAASCGS DLYSKDSCLS SLSSTSKGQW ERTLQADINT AKLALQNALS LEKPSAIQEY  120
MATDVKPKNI CYPYIKQEGN NSTSTYASSA ENIAKLLKQW TKSSSSTNNS ENSKGSSSTQ  180
LSCNYNNATN DFESISNFES FEQSKSDQFS QATTPEESKF YGESKRELDD QVPLSVMLEN  240
WLFDENEDLF
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000305}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF7378500.0JF737850.1 Petunia exserta isolate exse205 CAPS marker MYB60 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618496.11e-120PREDICTED: myb-related protein 306-like
RefseqXP_018631287.11e-120PREDICTED: myb-related protein 306-like
SwissprotP813925e-51MYB06_ANTMA; Myb-related protein 306
TrEMBLA0A1S3YHB71e-117A0A1S3YHB7_TOBAC; myb-related protein 306-like
STRINGXP_009618496.11e-120(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74650.11e-36myb domain protein 31
Publications ? help Back to Top
  1. Jackson D,Culianez-Macia F,Prescott AG,Roberts K,Martin C
    Expression patterns of myb genes from Antirrhinum flowers.
    Plant Cell, 1991. 3(2): p. 115-25
    [PMID:1840903]