PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03301g00018.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bZIP
Protein Properties Length: 365aa    MW: 40719.1 Da    PI: 9.5736
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03301g00018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.2e-1078121245
                               XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                               ++ k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Peinf101Scf03301g00018.1  78 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQEL 121
                               567899*************************9888888777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.8E-874124No hitNo description
SMARTSM003381.3E-877140IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.46179123IPR004827Basic-leucine zipper domain
PfamPF001703.3E-780122IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.31E-781124No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
PfamPF141443.2E-31164238IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
STMADISPST STDADTDEKN RVKREEGVCN LLVRGKEVLT ALAWVEAIVE RNKAKDGRMY  60
LNAQQLVAVA SDGSDRTRDQ KTLRRLAQNR EAARKSRLRK KAYVQQLESS RMKLTQLEQE  120
LQRARQQGIF ISGSGDQSQS MSGNGALAFD VEYARWLEEH NRRVNELRGA VNSHAGDAEL  180
RIIVDGILAH YDDIFRIKGD AAKADVFHIL SGMWKTPAER CFLWLGGFRS SELLKLLINQ  240
LEPLTEQQLL AINNLQQSSQ QAEDALSQGM EALQQSLAET LAGSLGPSGS SGNVANYMGQ  300
MAMAMGKLGT LEGFIRQADN LRQQTLQQMH RILTTRQSAR ALLAISDYFS RLRALSSLWL  360
ARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0314870.0AF031487.1 Nicotiana tabacum bZIP transcription factor (TGA2.2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001312154.10.0transcription factor TGA2-like
RefseqXP_009794636.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_016452354.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_016509560.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_018622908.10.0PREDICTED: transcription factor TGA2.2-like
RefseqXP_019232089.10.0PREDICTED: transcription factor TGA2.2-like
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A1J6KFU50.0A0A1J6KFU5_NICAT; Transcription factor tga2
TrEMBLA0A1U7XYD30.0A0A1U7XYD3_NICSY; transcription factor TGA2-like
TrEMBLQ9SQK10.0Q9SQK1_TOBAC; BZIP transcription factor
STRINGXP_009794636.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.41e-144TGACG motif-binding factor 6