PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf03230g00026.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Nin-like

Protein Properties

Length: 736aa MW: 84216.6 Da PI: 7.0785

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf03230g00026.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	56.6	5.1e-18	554	602	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ e l+++F ++ kdAAk L v++++LKr CR+y I+RWPh k +++ Peinf101Scf03230g00026.1 554 GITREILEQHFGMERKDAAKALHVSVSTLKRMCREYDISRWPHHKTRKV 602 6999*****************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.583	537	625	IPR003035	RWP-RK domain
Pfam	PF02042	5.8E-19	555	602	IPR003035	RWP-RK domain
SuperFamily	SSF54277	7.2E-15	643	734	No hit	No description
SMART	SM00666	9.2E-15	651	733	IPR000270	PB1 domain
PROSITE profile	PS51745	20.772	651	733	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	4.5E-15	652	732	No hit	No description
Pfam	PF00564	1.8E-16	652	732	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence Send to blast
MSEFDHPDAA PVVPSYTGIY RDTIKSIFQR NPFNCFCFIQ FWVPVKVNGL TFLSTADQPF 60 ALTNILDKRL CSYRKLCLHT LIPIDINDAN GESHLGPPGR VFIRGFPEYS SNIQSYSTVE 120 FPLLXNIQSY STAEFPLLQH AIQLGIQSYY AVPLFKLHEN HCLGVFEIAS TYKYYFQHFF 180 EPWKLALDQI KAGLDVVRER HSLPFAQIWI PDSQFSSIKA LIATGETIHS RLTYFDFAYY 240 SKYCYIQRGK AVVGRAFSSQ GLCFCKDVTL LSLTEYPLVR SAQKARLTLC FAICLRSKCA 300 NDFVCVVECF LRPNKMVNRY PQTFLNMLLS TMKEQLPGFI VASGKELGQR MRVEVIKVSR 360 RDELDSFEIG QSLPSVQSLQ DGGETTEIDS LRQQSNFQYV ENNVTTEQLV PCYSFEIGQL 420 LPSFQSLHDG GKTIEIDPSH HQPNLQNGES NIATAPVVPS CSSHKRDTFN NEEPVEVDLS 480 PQHPTEDAVT NRRRAGVDVA HDYTEIEKDT SEMMQPGLHI ELPNVEIDSR GKARINDKLE 540 HKEKTIQRIV KDHGITREIL EQHFGMERKD AAKALHVSVS TLKRMCREYD ISRWPHHKTR 600 KVNHHATKGA ALQGVEPYME DQERPNLSQE NGTDCLAHKR SPATSKPCDT VITLKVKYRD 660 HTIKFKLTPE STRVELQREV EKRLKISLQK FSIKYQDEDD EWITIATDSD LRDGMEELRS 720 LKRTHMRLLV TPNPDA

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence Send to blast

MSEFDHPDAA PVVPSYTGIY RDTIKSIFQR NPFNCFCFIQ FWVPVKVNGL TFLSTADQPF  60
ALTNILDKRL CSYRKLCLHT LIPIDINDAN GESHLGPPGR VFIRGFPEYS SNIQSYSTVE  120
FPLLXNIQSY STAEFPLLQH AIQLGIQSYY AVPLFKLHEN HCLGVFEIAS TYKYYFQHFF  180
EPWKLALDQI KAGLDVVRER HSLPFAQIWI PDSQFSSIKA LIATGETIHS RLTYFDFAYY  240
SKYCYIQRGK AVVGRAFSSQ GLCFCKDVTL LSLTEYPLVR SAQKARLTLC FAICLRSKCA  300
NDFVCVVECF LRPNKMVNRY PQTFLNMLLS TMKEQLPGFI VASGKELGQR MRVEVIKVSR  360
RDELDSFEIG QSLPSVQSLQ DGGETTEIDS LRQQSNFQYV ENNVTTEQLV PCYSFEIGQL  420
LPSFQSLHDG GKTIEIDPSH HQPNLQNGES NIATAPVVPS CSSHKRDTFN NEEPVEVDLS  480
PQHPTEDAVT NRRRAGVDVA HDYTEIEKDT SEMMQPGLHI ELPNVEIDSR GKARINDKLE  540
HKEKTIQRIV KDHGITREIL EQHFGMERKD AAKALHVSVS TLKRMCREYD ISRWPHHKTR  600
KVNHHATKGA ALQGVEPYME DQERPNLSQE NGTDCLAHKR SPATSKPCDT VITLKVKYRD  660
HTIKFKLTPE STRVELQREV EKRLKISLQK FSIKYQDEDD EWITIATDSD LRDGMEELRS  720
LKRTHMRLLV TPNPDA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015168300.1	0.0	PREDICTED: protein NLP7-like
Refseq	XP_015168301.1	0.0	PREDICTED: protein NLP7-like
Refseq	XP_015168302.1	0.0	PREDICTED: protein NLP7-like
TrEMBL	M1D5T7	0.0	M1D5T7_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400082373	0.0	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10406	5	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	5e-42	NIN like protein 7