PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Peinf101Scf03018g00021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 374aa MW: 44015.3 Da PI: 6.9434 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 150.8 | 6.5e-47 | 76 | 201 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 ppG+rF P deel+++yL+kkv +++l+ + i ev++y++ P++L k +ekewyfF++rd+ky++g+r+nra+ +gyWka Peinf101Scf03018g00021.1 76 PPGYRFCPYDEELIMHYLRKKVMNQPLPH-DKIIEVNLYQHSPQELSeKYPVLGEKEWYFFTPRDRKYPNGNRPNRAAGTGYWKA 159 9***************************9.7799************9344444899***************************** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg dk+++ k+ +vg +k Lvfy+g+ pkg kt+W+mhe+r+ Peinf101Scf03018g00021.1 160 TGADKPIKY-KDVKVGFRKALVFYEGKPPKGDKTNWIMHEFRV 201 *********.8999***************************97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.14E-57 | 72 | 227 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.03 | 75 | 227 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-25 | 76 | 201 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 374 aa Download sequence Send to blast |
MEIEQSNAQL TASSWNATTR NPQIQEPNKQ KQVDEDEKVL IVKPNSNDSL SYETKLKLNA 60 KANIRKDYVD DNFMFPPGYR FCPYDEELIM HYLRKKVMNQ PLPHDKIIEV NLYQHSPQEL 120 SEKYPVLGEK EWYFFTPRDR KYPNGNRPNR AAGTGYWKAT GADKPIKYKD VKVGFRKALV 180 FYEGKPPKGD KTNWIMHEFR VNESRRVKQN AKDMRLDDWV LCRIYKKVDK SFKSTRKEHE 240 QQYASRSCSS VGKMDNCDYE GTVDSSIVAS QNFEPPYQYD ITFDDHIIMD YTKYNPDYFS 300 HSLCYGARSN YGMVQPSFSP GSVFWDQKVY QESINFPMHF EFPNYYQDPY ETMDELQSQN 360 VLGSVFDNSS MDKL |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-56 | 75 | 227 | 15 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_019223930.1 | 1e-177 | PREDICTED: NAC transcription factor 29-like | ||||
TrEMBL | A0A314KX34 | 1e-176 | A0A314KX34_NICAT; Nac transcription factor nam-b1 | ||||
STRING | XP_009759087.1 | 1e-172 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA746 | 24 | 103 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G77450.1 | 2e-65 | NAC domain containing protein 32 |