PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02876g00007.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

WRKY

Protein Properties

Length: 197aa MW: 22945.5 Da PI: 8.8776

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02876g00007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	88.9	4.2e-28	123	181	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk++++ r+YY+C+s gC+vkkkver+ +d +++++tYeg+Hnhe Peinf101Scf02876g00007.1 123 LDDGYKWRKYGKKKVKSNTNLRNYYKCSSGGCKVKKKVERDGNDSSYLITTYEGRHNHE 181 59********************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.7E-29	108	182	IPR003657	WRKY domain
SuperFamily	SSF118290	3.66E-25	116	182	IPR003657	WRKY domain
PROSITE profile	PS50811	27.577	118	183	IPR003657	WRKY domain
SMART	SM00774	4.1E-30	123	182	IPR003657	WRKY domain
Pfam	PF03106	4.2E-22	124	181	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009867	Biological Process	jasmonic acid mediated signaling pathway
GO:0042742	Biological Process	defense response to bacterium
GO:0050832	Biological Process	defense response to fungus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence Send to blast
MSSTFIETSI SQIGNPSFTT PFLYSHMIDE EEYGYNFNHF GYTTSNNFQD FESSFLDQLL 60 VDYSPTNNSI STSKNHIMQE ISSTTPPNMY LKEKSKVGIK KDKTMNERRD AITFRTKTRL 120 EILDDGYKWR KYGKKKVKSN TNLRNYYKCS SGGCKVKKKV ERDGNDSSYL ITTYEGRHNH 180 ESSSFIYNHE MPSDQFP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2ayd_A	7e-23	112	181	3	72	WRKY transcription factor 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269\|PubMed:21030507}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	DQ460475	7e-77	DQ460475.1 Nicotiana tabacum cultivar Samsun NN putative WRKY transcription factor (WRKY12) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009763636.1	4e-87	PREDICTED: probable WRKY transcription factor 51
Refseq	XP_016482352.1	4e-87	PREDICTED: probable WRKY transcription factor 51
Swissprot	Q93WU9	2e-37	WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBL	A0A1S4B088	9e-86	A0A1S4B088_TOBAC; probable WRKY transcription factor 51
TrEMBL	A0A1U7VFG7	9e-86	A0A1U7VFG7_NICSY; probable WRKY transcription factor 51
STRING	XP_009763636.1	2e-86	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA14192	10	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	2e-18	WRKY DNA-binding protein 51

Publications ? help Back to Top
Yan C, et al. Injury Activates Ca2+/Calmodulin-Dependent Phosphorylation of JAV1-JAZ8-WRKY51 Complex for Jasmonate Biosynthesis. Mol. Cell, 2018. 70(1): p. 136-149.e7 [PMID:29625034]