PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02666g00001.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Nin-like

Protein Properties

Length: 817aa MW: 91008.6 Da PI: 6.3959

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02666g00001.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	35.1	2.6e-11	683	730	5	52
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ +l+++F ++++dA+k+L v++ +L iC yG + WPh k k++ Peinf101Scf02666g00001.1 683 ITRTKLEEQFGKTLNDASKNLSVSPATLGEICKLYGYSQWPHHKTKKV 730 88999***************************************9997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	9.75	664	750	IPR003035	RWP-RK domain
Pfam	PF02042	9.8E-10	683	730	IPR003035	RWP-RK domain
SuperFamily	SSF54277	4.25E-12	735	809	No hit	No description
PROSITE profile	PS51745	17.233	743	816	IPR000270	PB1 domain
SMART	SM00666	1.9E-7	743	816	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	3.3E-11	743	809	No hit	No description
Pfam	PF00564	1.3E-10	745	808	IPR000270	PB1 domain
CDD	cd05992	1.33E-10	746	809	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence Send to blast
MFFVFPQYLN LLFRPAAAPP VVPSGTGIDK DTIRAVLQGI YRCDVCFVQF WAPVKVNGST 60 FLSTADQPFA LTGQLDKRLC SYRKLCLNTL IPIDIHNANG EVLLGPPGRV FIRGFPEYSP 120 DIQSYSVVEF PLLEDAIQLG IRKVCSIPVF KLPQKHFCRG VFEIASTDPN LSTTHILKPW 180 KLALDQIKAG LDVVCKTHSL PFAQSWIPDF RPSSIKALIA TGKRSDDGLN SMFDIGHASD 240 FSCIQSGKAV VGRAFSSQES CFCKDVSLLS LTEYPLVPSA RKARLTRCFA ICLRSKCVNN 300 FICVVEYFLP PNEMVDRDVE GFLNMLLSTM KEQLPDVVVA SGKELGEWMR VEVVKVSPSD 360 ELDSFEIGQP LPRVQSLQDG VENNVTTALF QSHRPEHIDT LVPRPTEEAV TNIGTVDEDI 420 AHIDHIEFGN RGEMMQPDSH FKKPNVEIDF TVKARSSDTE AECVNGESNF ISGATKIQSI 480 NLLNNNIIQT IVEDYGNASE LLEQCFVTTE LNSFESGQPL SSVQSLQDGG KIIGISSLHQ 540 QPNLQNGENN VATALLVPSC SSKKCDSFNI EGPVEGDLIP QHPTVTYRRR VDVDVAPDHI 600 EIEKGRSEMM QPGLHFEKVD STGNARSNDK VEHSDSARNG RQLVEPEVIN RESSFVSGEA 660 TKTDSQKKKK KNAIQRIVKD LPITRTKLEE QFGKTLNDAS KNLSVSPATL GEICKLYGYS 720 QWPHHKTKKV NHHASRGLPC DSVMNVKLKY GGHNINFKLT PESTRVDLVA AMEKRFDISF 780 QRFSFKYQDK DGEWILIATD SDLRDVLSLR QHIVTYL

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence Send to blast

MFFVFPQYLN LLFRPAAAPP VVPSGTGIDK DTIRAVLQGI YRCDVCFVQF WAPVKVNGST  60
FLSTADQPFA LTGQLDKRLC SYRKLCLNTL IPIDIHNANG EVLLGPPGRV FIRGFPEYSP  120
DIQSYSVVEF PLLEDAIQLG IRKVCSIPVF KLPQKHFCRG VFEIASTDPN LSTTHILKPW  180
KLALDQIKAG LDVVCKTHSL PFAQSWIPDF RPSSIKALIA TGKRSDDGLN SMFDIGHASD  240
FSCIQSGKAV VGRAFSSQES CFCKDVSLLS LTEYPLVPSA RKARLTRCFA ICLRSKCVNN  300
FICVVEYFLP PNEMVDRDVE GFLNMLLSTM KEQLPDVVVA SGKELGEWMR VEVVKVSPSD  360
ELDSFEIGQP LPRVQSLQDG VENNVTTALF QSHRPEHIDT LVPRPTEEAV TNIGTVDEDI  420
AHIDHIEFGN RGEMMQPDSH FKKPNVEIDF TVKARSSDTE AECVNGESNF ISGATKIQSI  480
NLLNNNIIQT IVEDYGNASE LLEQCFVTTE LNSFESGQPL SSVQSLQDGG KIIGISSLHQ  540
QPNLQNGENN VATALLVPSC SSKKCDSFNI EGPVEGDLIP QHPTVTYRRR VDVDVAPDHI  600
EIEKGRSEMM QPGLHFEKVD STGNARSNDK VEHSDSARNG RQLVEPEVIN RESSFVSGEA  660
TKTDSQKKKK KNAIQRIVKD LPITRTKLEE QFGKTLNDAS KNLSVSPATL GEICKLYGYS  720
QWPHHKTKKV NHHASRGLPC DSVMNVKLKY GGHNINFKLT PESTRVDLVA AMEKRFDISF  780
QRFSFKYQDK DGEWILIATD SDLRDVLSLR QHIVTYL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006354236.1	1e-155	PREDICTED: protein NLP6-like isoform X2
TrEMBL	M1B291	1e-152	M1B291_SOLTU; Uncharacterized protein
TrEMBL	M1B292	1e-153	M1B292_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400035438	1e-153	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10406	5	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-46	Nin-like family protein