PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf02593g01044.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 289aa MW: 33293.4 Da PI: 6.1053 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.5 | 3e-11 | 13 | 82 | 57 | 128 |
NAM 57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 y F++ ++ + +gk+ nr++ g+Wka ++k vl++k++++g kt+ f ++ + ++ +W m+ey l Peinf101Scf02593g01044.1 13 VNYVFTQLKRISVRGKNVNRIAGGGTWKAHENKKLVLNNKKSVIGFTKTFLFEEKYSD--KSIQWHMKEYYL 82 459*************************************************954444..589*******87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.112 | 1 | 109 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.14E-13 | 12 | 108 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.0E-6 | 15 | 81 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence Send to blast |
MTQSEIFDDS TDVNYVFTQL KRISVRGKNV NRIAGGGTWK AHENKKLVLN NKKSVIGFTK 60 TFLFEEKYSD KSIQWHMKEY YLSDIVLKAL RERHQIRHQD YVLCRIRRNV KFCSTTNNFQ 120 SGEKNVDLGL YMPTSSQNHG KFSVSWTPSI SKSSEDQFQA LQENQEKFPV SWTPSISKSS 180 EVQFQALQEN QELSNFLNGN NNGSLVNLVK EEAEWLDPMS QLPLISTEEE KVSFQESTID 240 IASYHKELDA YAAAILKSNP PMVPYIPQEL DDCPLFSEDF YIGHHALWS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009615661.1 | 3e-64 | PREDICTED: uncharacterized protein LOC104108353 | ||||
STRING | XP_009615661.1 | 1e-63 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14771 | 2 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 2e-08 | NAC family protein |