PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02545g01021.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 331aa    MW: 37166.9 Da    PI: 10.2685
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02545g01021.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.000914567123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              ++C+ C+k+F++   L  H  +H
  Peinf101Scf02545g01021.1 45 FECKTCNKRFPSFQALGGHRASH 67
                              89**********99999998887 PP
2zf-C2H213.30.0002590112123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C++Cg+ Fs    L  H+r+H
  Peinf101Scf02545g01021.1  90 HECSICGMEFSLGQALGGHMRRH 112
                               78********************9 PP
3zf-C2H211.50.00091203225123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C+ C+k+F++   L  H  +H
  Peinf101Scf02545g01021.1 203 FECKTCNKRFPSFQALGGHRASH 225
                               89**********99999998887 PP
4zf-C2H213.30.00025247269123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C++Cg+ Fs    L  H+r+H
  Peinf101Scf02545g01021.1 247 HECSICGMEFSLGQALGGHMRRH 269
                               78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.59E-845112No hitNo description
PROSITE profilePS5015710.0764572IPR007087Zinc finger, C2H2
PfamPF139122.9E-124569IPR007087Zinc finger, C2H2
SMARTSM003550.0754567IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804767IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.606.0E-487115IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139122.9E-990115IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.69990117IPR007087Zinc finger, C2H2
SMARTSM003550.06790112IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028092112IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.118203230IPR007087Zinc finger, C2H2
PfamPF139121.1E-12203227IPR007087Zinc finger, C2H2
SMARTSM003550.075203225IPR015880Zinc finger, C2H2-like
SuperFamilySSF576673.83E-9203269No hitNo description
PROSITE patternPS000280205225IPR007087Zinc finger, C2H2
PfamPF139124.8E-9247271IPR007087Zinc finger, C2H2
SMARTSM003550.067247269IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.473247269IPR007087Zinc finger, C2H2
PROSITE patternPS000280249269IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MSSIKRSRSE EYGQVEAEAM ANCLMLLSKL NDHKTSKNQD HHNEFECKTC NKRFPSFQAL  60
GGHRASHKRT KVLAGAGEFL AQQVKKNKMH ECSICGMEFS LGQALGGHMR RHRDENNKTL  120
KVARKTTTMI PVLKKSNSSK RIFCLDLNLS PDDENVDLNA MKRSREDRQV EAAAMANCLM  180
LLSKLNDKST STTSTNQDHH NDFECKTCNK RFPSFQALGG HRASHKRPKL LIGAGEFLVQ  240
PSSKKMHECS ICGMEFSLGQ ALGGHMRRHR AAIDEKSKAA TKAMMIPVLK KSNSSKRIFC  300
LDLNLTPRNE DVDLKLWPTA PVSSPVLRIF I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0065990.0AB006599.1 Petunia x hybrida mRNA for ZPT2-12, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015078584.22e-92zinc finger protein ZAT9-like
RefseqXP_025887528.12e-92LOW QUALITY PROTEIN: zinc finger protein ZAT1
TrEMBLO220841e-121O22084_PETHY; ZPT2-12
STRINGXP_009608410.11e-87(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.12e-39C2H2 family protein