PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02543g00008.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Dof
Protein Properties Length: 321aa    MW: 34685.2 Da    PI: 9.0894
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02543g00008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.43.2e-3869128362
                    zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                               e+ lkcprCdstntkfCy+nny+lsqPr+fCk+CrryWt+GGalr vPvGgg+r+nkks+
  Peinf101Scf02543g00008.1  69 EAGLKCPRCDSTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKKSK 128
                               6779*****************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074787.0E-3752121IPR003851Zinc finger, Dof-type
PfamPF027012.8E-3271126IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.50672126IPR003851Zinc finger, Dof-type
PROSITE patternPS01361074110IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MVFSSFPVYL DHPNLQQLQQ PDHQQGNPGV ENPQLSSLPP PMQVGASPGS IRPGSMVDRA  60
RLAKIPLPEA GLKCPRCDST NTKFCYFNNY NLSQPRHFCK TCRRYWTRGG ALRSVPVGGG  120
CRRNKKSKNS SNNSKTAGGN STERQIGTTS TSTSVRSPSS CSTDITGHHF SQSSTQLTPL  180
MAAFQNLNHH YGGFQPPPLV STHNNNGGLG EMGFQIGSNN NTNNLQASGG SDHHQWRLPS  240
LAAGTGSFEP TTNLHPFQVE GIEASSSGIS HDAVRMEENN NNQGLNSTKQ FLGTLENNQY  300
WGGNAWTGFS GLNSSSTNHL L
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00407DAPTransfer from AT3G55370Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774236.11e-172PREDICTED: dof zinc finger protein DOF2.4-like
RefseqXP_009774300.11e-172PREDICTED: dof zinc finger protein DOF2.4-like
RefseqXP_009774363.11e-172PREDICTED: dof zinc finger protein DOF2.4-like
RefseqXP_009774425.11e-172PREDICTED: dof zinc finger protein DOF2.4-like
TrEMBLA0A1U7WAH61e-170A0A1U7WAH6_NICSY; dof zinc finger protein DOF2.4-like
STRINGXP_009774236.11e-171(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.12e-47OBF-binding protein 3