PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02316g00011.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB
Protein Properties Length: 306aa    MW: 34614.5 Da    PI: 9.4771
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02316g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.3e-082569345
                              SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
           Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                              +WT+ E + + +a +++ ++   +W ++a++++ g+t  +++  + 
  Peinf101Scf02316g00011.1 25 KWTPAENKAFENALALFDKDtpdRWQKVAEMVP-GKTVVDVIKQYK 69
                              8********************************.******998886 PP
2Myb_DNA-binding45.12.3e-14133177347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
  Peinf101Scf02316g00011.1 133 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 177
                               7*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.0E-41669IPR009057Homeodomain-like
PROSITE profilePS512938.9012174IPR017884SANT domain
SMARTSM007172.7E-102274IPR001005SANT/Myb domain
SuperFamilySSF466894.81E-122479IPR009057Homeodomain-like
CDDcd001671.20E-72571No hitNo description
PfamPF002493.1E-72570IPR001005SANT/Myb domain
PROSITE profilePS5129419.663126182IPR017930Myb domain
SuperFamilySSF466897.18E-17127181IPR009057Homeodomain-like
TIGRFAMsTIGR015573.2E-17129181IPR006447Myb domain, plants
SMARTSM007172.9E-12130180IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.4E-12131177IPR009057Homeodomain-like
CDDcd001672.75E-11133178No hitNo description
PfamPF002499.8E-13133177IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MEILSPSPYI SNSSWFLDEN SKSTKWTPAE NKAFENALAL FDKDTPDRWQ KVAEMVPGKT  60
VVDVIKQYKE LEDDVSRIEA GLISIPGYGT TSPFTLEWGN SHSFDEYKQS YVVGGKRSLS  120
NRPQEQERKK GIPWTEEEHK LFLMGLKKYG KGDWRNISRN FVITRTPTQV ASHAQKYFIR  180
QLSGGKDKRR ASIHDITTIN LNDNQTSSPD HQTPASLDQS NVISQQAKSA SNAMHKMPFQ  240
WTQANNGFNS AQGSLFMSPP YGGNSYGNTK MQSQSLQRGA LPMHESYFGS QSMNFQLQSA  300
QQYHHS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-1526911176RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009603384.10.0PREDICTED: transcription factor DIVARICATA-like
RefseqXP_009603385.10.0PREDICTED: transcription factor DIVARICATA-like
RefseqXP_016432478.10.0PREDICTED: transcription factor DIVARICATA-like
SwissprotQ8S9H71e-146DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A1S3WXT50.0A0A1S3WXT5_TOBAC; transcription factor DIVARICATA-like
STRINGXP_009603384.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-101Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]