PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02234g00030.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family GATA
Protein Properties Length: 680aa    MW: 74941.3 Da    PI: 10.0406
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02234g00030.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.22.2e-18217250134
                      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                               C++C  tkTp+WR+gp g+ktLCnaCG++yr+ +
  Peinf101Scf02234g00030.1 217 CTHCEITKTPQWREGPLGPKTLCNACGVRYRSGR 250
                               *******************************987 PP
2GATA28.91.6e-09424445122
                      GATA   1 CsnCgttkTplWRrgpdgnktL 22 
                               C+ Cg+tkTp+WR+gp g+ktL
  Peinf101Scf02234g00030.1 424 CTRCGVTKTPQWREGPLGPKTL 445
                               ********************98 PP
3GATA29.31.2e-09498519122
                      GATA   1 CsnCgttkTplWRrgpdgnktL 22 
                               C++C +tkTp+WR+gp g+ktL
  Peinf101Scf02234g00030.1 498 CTHCEVTKTPQWREGPMGPKTL 519
                               ********************98 PP
4GATA53.72.8e-17572605134
                      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                               C++C +tkTp+WR gp g+ktLCnaCG++yr+ +
  Peinf101Scf02234g00030.1 572 CRHCEATKTPQWRGGPWGPKTLCNACGVRYRSGR 605
                               *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577161.38E-14210273No hitNo description
SMARTSM004012.6E-16211261IPR000679Zinc finger, GATA-type
PROSITE profilePS5011411.213215247IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.105.9E-14216248IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.00E-13216263No hitNo description
PROSITE patternPS003440217242IPR000679Zinc finger, GATA-type
PfamPF003203.9E-16217250IPR000679Zinc finger, GATA-type
SMARTSM004010.23345387IPR000679Zinc finger, GATA-type
SMARTSM004010.006418461IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.103.5E-5423445IPR013088Zinc finger, NHR/GATA-type
PfamPF003205.1E-7424445IPR000679Zinc finger, GATA-type
SMARTSM004013.4E-4492539IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.2E-5497519IPR013088Zinc finger, NHR/GATA-type
PfamPF003202.8E-7498519IPR000679Zinc finger, GATA-type
SMARTSM004015.4E-14566616IPR000679Zinc finger, GATA-type
PROSITE profilePS5011410.739570602IPR000679Zinc finger, GATA-type
CDDcd002027.80E-13571618No hitNo description
SuperFamilySSF577168.55E-14571629No hitNo description
Gene3DG3DSA:3.30.50.101.3E-12571603IPR013088Zinc finger, NHR/GATA-type
PROSITE patternPS003440572597IPR000679Zinc finger, GATA-type
PfamPF003205.4E-15572605IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 680 aa     Download sequence    Send to blast
MANSRKMTMV ESRGGIPTGP VVDEDFDDIL NFFDFPLETL EEDGLGVEWN ASESKFLGPI  60
PTDVLMDFPP VPHGNIGNGR VNAAPNFNRP NKLAEAQGTG IFQTQSPVSV LESNNSCPGG  120
KSISIKHDIA IPVRPRSKRP RSSAVNPWIL MEPISSTRLA SRKISDGRKG KEKKRKVLSG  180
AKEAMKNSVQ QINDTMPVAD VTKKLTSVQQ SSFVKRCTHC EITKTPQWRE GPLGPKTLCN  240
ACGVRYRSGR LFPEYRPAAS PTFVPSLHSN SHRKVIEMRK KAVDGSAAVE EPYKMIMGRK  300
REALPEPTTV EDTPMSPAPE FVPMSSYLFD IADVTEKKLA CAQQSGCVKK CTHCEVTKTP  360
QLREEPLGPK TLSGEEKRKV SMLSGAKEAM KISVRQINDT MPKMADFTEK KLACAQQSGS  420
VKKCTRCGVT KTPQWREGPL GPKTLSGKEE TTKVSMLSGA KEAMKNVVQQ INDKMPQIAD  480
ITKKKLTSAR QSSFVKRCTH CEVTKTPQWR EGPMGPKTLS GKEKKWNVSM LSGAKEAVKN  540
SVQQINDTMP QIADVTEKKL ASVPESSFVQ KCRHCEATKT PQWRGGPWGP KTLCNACGVR  600
YRSGRLFPEY RPTASPTFVP SLHSNSHRKV IEMIKEAVDG SAAVEEPHRA IIGRKREAWA  660
EPTIVEGTPM SPAPEFVPMC
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00130DAPTransfer from AT1G08010Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006340186.11e-175PREDICTED: GATA transcription factor 11-like
TrEMBLM1AE861e-173M1AE86_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000208761e-174(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31342149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.26e-41GATA transcription factor 11