PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf02210g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24797.8 Da PI: 6.8894 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.1 | 1.9e-17 | 38 | 87 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+G+r ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+ +++g+ Peinf101Scf02210g00002.1 38 YRGIRKRS-WGKWVSEIREPRK---KSRIWLGTFKTAEMAARAHDVAAFAIKGH 87 9****888.**********843...6***********************99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 23.051 | 37 | 94 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.9E-37 | 37 | 100 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.75E-21 | 37 | 95 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-31 | 37 | 95 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.6E-11 | 38 | 87 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.84E-31 | 38 | 96 | No hit | No description |
PRINTS | PR00367 | 6.0E-11 | 38 | 49 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.0E-11 | 60 | 76 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MQEPKDNVQE NQQASDSDNN NKTKKKTKKT DDTRHHTYRG IRKRSWGKWV SEIREPRKKS 60 RIWLGTFKTA EMAARAHDVA AFAIKGHSAF LNFPELVHQL PRPATKCRKD IQAAAAKAAA 120 LDDHEAEPSL AKLIEPFCME ESRTSTTKLS SSSSSDSLLP LHIIKEPFLD LPDLFLDLSK 180 QVDEFYYNSS LELTAAESNY SESWPEDLVL WDYSSGAAI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-19 | 35 | 94 | 12 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015084630.2 | 6e-60 | ethylene-responsive transcription factor ERF038 | ||||
Refseq | XP_028077791.1 | 1e-59 | ethylene-responsive transcription factor ERF038-like | ||||
Swissprot | Q8LBQ7 | 7e-48 | ERF34_ARATH; Ethylene-responsive transcription factor ERF034 | ||||
TrEMBL | A0A2R6QNQ1 | 2e-57 | A0A2R6QNQ1_ACTCH; Ethylene-responsive transcription factor TINY like | ||||
STRING | XP_009610624.1 | 5e-58 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 2e-40 | ERF family protein |
Publications ? help Back to Top | |||
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